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Cluster: SPMP31_bin.46_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_40 opera_contig_40_106 121783 123405 + 3.A.1.5.35
TC opera_contig_40 opera_contig_40_107 123655 124695 + 3.A.1.5.35
NULL(UNKNOWN) opera_contig_40 opera_contig_40_108 125131 125283 - NULL(UNKNOWN)
[View Structural Homologs]
TC opera_contig_40 opera_contig_40_109 125361 125672 + 3.A.1.5.11
TC opera_contig_40 opera_contig_40_110 125674 126759 + 3.A.1.5.37
TC opera_contig_40 opera_contig_40_111 126760 127794 + 3.A.1.5.37
STP opera_contig_40 opera_contig_40_112 128127 130430 + GAF | SpoIIE
STP opera_contig_40 opera_contig_40_113 130517 131290 + STAS
TC opera_contig_40 opera_contig_40_114 131377 132369 - 2.A.20.1.5
pfam opera_contig_40 opera_contig_40_115 132362 132991 - PhoU_div
NULL(UNKNOWN) opera_contig_40 opera_contig_40_116 133334 134116 + NULL(UNKNOWN)
[View Structural Homologs]
TC opera_contig_40 opera_contig_40_117 134244 136229 - 4.A.2.1.7
STP opera_contig_40 opera_contig_40_118 136340 137239 - PfkB
TF opera_contig_40 opera_contig_40_119 137241 137993 - HTH_DeoR
CAZyme opera_contig_40 opera_contig_40_120 138393 139421 + GT2
pfam opera_contig_40 opera_contig_40_121 139484 140572 + PFK
NULL(UNKNOWN) opera_contig_40 opera_contig_40_122 140717 142462 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme opera_contig_40 opera_contig_40_123 142531 143556 + GT2
Gene ID: opera_contig_40_106
Type: TC
Location: 121783 - 123405 (+)
Gene ID: opera_contig_40_107
Type: TC
Location: 123655 - 124695 (+)
Gene ID: opera_contig_40_108
Type:
Location: 125131 - 125283 (-)
Gene ID: opera_contig_40_109
Type: TC
Location: 125361 - 125672 (+)
Gene ID: opera_contig_40_110
Type: TC
Location: 125674 - 126759 (+)
Gene ID: opera_contig_40_111
Type: TC
Location: 126760 - 127794 (+)
Gene ID: opera_contig_40_112
Type: STP
Location: 128127 - 130430 (+)
Gene ID: opera_contig_40_113
Type: STP
Location: 130517 - 131290 (+)
Gene ID: opera_contig_40_114
Type: TC
Location: 131377 - 132369 (-)
Gene ID: opera_contig_40_115
Type: pfam
Location: 132362 - 132991 (-)
Gene ID: opera_contig_40_116
Type:
Location: 133334 - 134116 (+)
Gene ID: opera_contig_40_117
Type: TC
Location: 134244 - 136229 (-)
Gene ID: opera_contig_40_118
Type: STP
Location: 136340 - 137239 (-)
Gene ID: opera_contig_40_119
Type: TF
Location: 137241 - 137993 (-)
Gene ID: opera_contig_40_120
Type: CAZyme
Location: 138393 - 139421 (+)
Gene ID: opera_contig_40_121
Type: pfam
Location: 139484 - 140572 (+)
Gene ID: opera_contig_40_122
Type:
Location: 140717 - 142462 (+)
Gene ID: opera_contig_40_123
Type: CAZyme
Location: 142531 - 143556 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_40_117 vegetarian > vegan 1.48040 0.01287

🧭 Explore Read Mapping of CGC

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