PROTEIN: opera_contig_40_116
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Protein File & Metadata
Source:
opera_contig_40_116.pdb
Genome ID:
Protein ID:
opera_contig_40_116
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Protein Sequence
MSSKDGMDGG CSASEKSLTA RACRGAHGTC AALGIALAVL LGSLGLMGPV GVVARPALAA 60 GMVDRHAECS LTIRASYGDE GSMAIPNMTL DLYPVATLDE SSNPRLMDDY AGSGVNLGSV 120 SLASDWDSAA ATLLTWVGEN NIAPMRGAVT DADGVARFTG LEPGIYLVSG RPVKMGGHTY 180 APATYLAGVP NLSDDEWSYD IVSECKVAEV DVVSYGSAPK GGEELSEALA GVNPLVVGAI 240 AFGGVAAVVL AVSVMSLHRR 260
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5xcb-assembly1.cif.gz_A | 57 | 249 | 1 | 294 | 0.4647 |
0.6702 |
| 5xcc-assembly2.cif.gz_B | 58 | 249 | 1 | 300 | 0.396 |
0.6668 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.