Cluster: SPMP06_bin.48_CGC81
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: SPMP06_bin.48
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_191945 | opera_contig_191945_41 | 57414 | 58466 | - | 1.A.35.3.2 |
| pfam | opera_contig_191945 | opera_contig_191945_42 | 58569 | 61073 | - | MutS_V | Smr | MSSS |
| NULL(UNKNOWN) | opera_contig_191945 | opera_contig_191945_43 | 61360 | 61449 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_191945 | opera_contig_191945_44 | 61729 | 63483 | - | GH123 |
| CAZyme | opera_contig_191945 | opera_contig_191945_45 | 63534 | 64736 | - | GH88 |
| CAZyme | opera_contig_191945 | opera_contig_191945_46 | 64738 | 66693 | - | PL33_1 |
| CAZyme | opera_contig_191945 | opera_contig_191945_47 | 66713 | 68557 | - | PL35 |
| TC | opera_contig_191945 | opera_contig_191945_48 | 68627 | 70339 | - | 8.A.46.1.4 |
| TC | opera_contig_191945 | opera_contig_191945_49 | 70351 | 73509 | - | 1.B.14.6.1 |
Gene ID: opera_contig_191945_41
Type: TC
Location: 57414 - 58466 (-)
Type: TC
Location: 57414 - 58466 (-)
Gene ID: opera_contig_191945_42
Type: pfam
Location: 58569 - 61073 (-)
Type: pfam
Location: 58569 - 61073 (-)
Gene ID: opera_contig_191945_43
Type:
Location: 61360 - 61449 (-)
Type:
Location: 61360 - 61449 (-)
Gene ID: opera_contig_191945_44
Type: CAZyme
Location: 61729 - 63483 (-)
Type: CAZyme
Location: 61729 - 63483 (-)
Gene ID: opera_contig_191945_45
Type: CAZyme
Location: 63534 - 64736 (-)
Type: CAZyme
Location: 63534 - 64736 (-)
Gene ID: opera_contig_191945_46
Type: CAZyme
Location: 64738 - 66693 (-)
Type: CAZyme
Location: 64738 - 66693 (-)
Gene ID: opera_contig_191945_47
Type: CAZyme
Location: 66713 - 68557 (-)
Type: CAZyme
Location: 66713 - 68557 (-)
Gene ID: opera_contig_191945_48
Type: TC
Location: 68627 - 70339 (-)
Type: TC
Location: 68627 - 70339 (-)
Gene ID: opera_contig_191945_49
Type: TC
Location: 70351 - 73509 (-)
Type: TC
Location: 70351 - 73509 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides caccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_191945_44 | vegan > omnivore | 2.46755 | 0.01246 |
| opera_contig_191945_47 | vegan > omnivore | 2.09484 | 0.01246 |