Cluster: SPMP06_bin.48_CGC80
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: SPMP06_bin.48
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_191945 | opera_contig_191945_27 | 33695 | 35524 | + | 2.A.38.4.3 |
| pfam | opera_contig_191945 | opera_contig_191945_28 | 35529 | 36215 | + | TrkA_N | F420_oxidored |
| pfam | opera_contig_191945 | opera_contig_191945_29 | 36243 | 37274 | + | Exo_endo_phos |
| CAZyme | opera_contig_191945 | opera_contig_191945_30 | 37405 | 39846 | - | GH2 |
| CAZyme | opera_contig_191945 | opera_contig_191945_31 | 39853 | 40947 | - | GH53 |
| pfam | opera_contig_191945 | opera_contig_191945_32 | 40961 | 42724 | - | SusE | DUF5111 | DUF5114 |
| TC | opera_contig_191945 | opera_contig_191945_33 | 42748 | 44325 | - | 8.A.46.1.1 |
| TC | opera_contig_191945 | opera_contig_191945_34 | 44349 | 47324 | - | 1.B.14.6.1 |
| CAZyme | opera_contig_191945 | opera_contig_191945_35 | 47394 | 50000 | - | GH147 |
Gene ID: opera_contig_191945_27
Type: TC
Location: 33695 - 35524 (+)
Type: TC
Location: 33695 - 35524 (+)
Gene ID: opera_contig_191945_28
Type: pfam
Location: 35529 - 36215 (+)
Type: pfam
Location: 35529 - 36215 (+)
Gene ID: opera_contig_191945_29
Type: pfam
Location: 36243 - 37274 (+)
Type: pfam
Location: 36243 - 37274 (+)
Gene ID: opera_contig_191945_30
Type: CAZyme
Location: 37405 - 39846 (-)
Type: CAZyme
Location: 37405 - 39846 (-)
Gene ID: opera_contig_191945_31
Type: CAZyme
Location: 39853 - 40947 (-)
Type: CAZyme
Location: 39853 - 40947 (-)
Gene ID: opera_contig_191945_32
Type: pfam
Location: 40961 - 42724 (-)
Type: pfam
Location: 40961 - 42724 (-)
Gene ID: opera_contig_191945_33
Type: TC
Location: 42748 - 44325 (-)
Type: TC
Location: 42748 - 44325 (-)
Gene ID: opera_contig_191945_34
Type: TC
Location: 44349 - 47324 (-)
Type: TC
Location: 44349 - 47324 (-)
Gene ID: opera_contig_191945_35
Type: CAZyme
Location: 47394 - 50000 (-)
Type: CAZyme
Location: 47394 - 50000 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides caccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_191945_32 | vegan > omnivore | 1.10485 | 0.01246 |