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Cluster: SPMP06_bin.48_CGC78

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_191944 opera_contig_191944_53 69767 72928 + 1.B.14.6.1
pfam opera_contig_191944 opera_contig_191944_54 72945 74660 + SusD_RagB | SusD-like_3
TF opera_contig_191944 opera_contig_191944_55 74735 78811 - HTH_AraC
CAZyme opera_contig_191944 opera_contig_191944_56 79029 80789 + GH3
CAZyme opera_contig_191944 opera_contig_191944_57 80801 82066 + CE17
TC opera_contig_191944 opera_contig_191944_58 82179 84308 - 2.A.37.2.5
Gene ID: opera_contig_191944_53
Type: TC
Location: 69767 - 72928 (+)
Gene ID: opera_contig_191944_54
Type: pfam
Location: 72945 - 74660 (+)
Gene ID: opera_contig_191944_55
Type: TF
Location: 74735 - 78811 (-)
Gene ID: opera_contig_191944_56
Type: CAZyme
Location: 79029 - 80789 (+)
Gene ID: opera_contig_191944_57
Type: CAZyme
Location: 80801 - 82066 (+)
Gene ID: opera_contig_191944_58
Type: TC
Location: 82179 - 84308 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_191944_53 vegan > omnivore 1.02834 0.01246
opera_contig_191944_54 vegan > omnivore 1.53169 0.01246
opera_contig_191944_55 vegan > omnivore 1.33814 0.01246
opera_contig_191944_57 vegan > omnivore 1.03224 0.01246

🧭 Explore Read Mapping of CGC

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