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Cluster: SPMP06_bin.48_CGC70

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_191942 opera_contig_191942_232 297490 299130 + GH33
TC opera_contig_191942 opera_contig_191942_233 299134 300369 + 2.A.1.14.14
CAZyme opera_contig_191942 opera_contig_191942_234 300388 301812 + CE20
TC opera_contig_191942 opera_contig_191942_235 301883 305146 + 1.B.14.6.1
pfam opera_contig_191942 opera_contig_191942_236 305164 306621 + SusD_RagB | SusD-like_2 | SusD-like_3
CAZyme opera_contig_191942 opera_contig_191942_237 306634 307743 + GH33
Gene ID: opera_contig_191942_232
Type: CAZyme
Location: 297490 - 299130 (+)
Gene ID: opera_contig_191942_233
Type: TC
Location: 299134 - 300369 (+)
Gene ID: opera_contig_191942_234
Type: CAZyme
Location: 300388 - 301812 (+)
Gene ID: opera_contig_191942_235
Type: TC
Location: 301883 - 305146 (+)
Gene ID: opera_contig_191942_236
Type: pfam
Location: 305164 - 306621 (+)
Gene ID: opera_contig_191942_237
Type: CAZyme
Location: 306634 - 307743 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_191942_232 vegan > omnivore 1.09883 0.01246
opera_contig_191942_237 vegan > omnivore 1.44259 0.01246

🧭 Explore Read Mapping of CGC

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