Cluster: SPMP06_bin.48_CGC62
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP06_bin.48
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_191941 | opera_contig_191941_223 | 320333 | 322168 | + | 1.A.13.2.3 |
| NULL(UNKNOWN) | opera_contig_191941 | opera_contig_191941_224 | 322316 | 322462 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_191941 | opera_contig_191941_225 | 322453 | 324012 | - | GH20 |
| pfam | opera_contig_191941 | opera_contig_191941_226 | 324470 | 324823 | - | ArsC |
| NULL(UNKNOWN) | opera_contig_191941 | opera_contig_191941_227 | 324865 | 325443 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_191941 | opera_contig_191941_228 | 325553 | 328687 | + | 1.B.14.6.13 |
| TC | opera_contig_191941 | opera_contig_191941_229 | 328702 | 330300 | + | 8.A.46.2.1 |
| pfam | opera_contig_191941 | opera_contig_191941_230 | 330373 | 331080 | + | DUF5020 |
| TC | opera_contig_191941 | opera_contig_191941_231 | 331105 | 332421 | + | 2.A.40.4.2 |
Gene ID: opera_contig_191941_223
Type: TC
Location: 320333 - 322168 (+)
Type: TC
Location: 320333 - 322168 (+)
Gene ID: opera_contig_191941_224
Type:
Location: 322316 - 322462 (-)
Type:
Location: 322316 - 322462 (-)
Gene ID: opera_contig_191941_225
Type: CAZyme
Location: 322453 - 324012 (-)
Type: CAZyme
Location: 322453 - 324012 (-)
Gene ID: opera_contig_191941_226
Type: pfam
Location: 324470 - 324823 (-)
Type: pfam
Location: 324470 - 324823 (-)
Gene ID: opera_contig_191941_227
Type:
Location: 324865 - 325443 (-)
Type:
Location: 324865 - 325443 (-)
Gene ID: opera_contig_191941_228
Type: TC
Location: 325553 - 328687 (+)
Type: TC
Location: 325553 - 328687 (+)
Gene ID: opera_contig_191941_229
Type: TC
Location: 328702 - 330300 (+)
Type: TC
Location: 328702 - 330300 (+)
Gene ID: opera_contig_191941_230
Type: pfam
Location: 330373 - 331080 (+)
Type: pfam
Location: 330373 - 331080 (+)
Gene ID: opera_contig_191941_231
Type: TC
Location: 331105 - 332421 (+)
Type: TC
Location: 331105 - 332421 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides caccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.