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Cluster: SPMP06_bin.48_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_191938 opera_contig_191938_276 354110 354736 - 9.B.18.1.3
CAZyme opera_contig_191938 opera_contig_191938_277 354772 355524 - GT2
CAZyme opera_contig_191938 opera_contig_191938_278 355526 356398 - GT11
CAZyme opera_contig_191938 opera_contig_191938_279 356410 357519 - GT4
pfam opera_contig_191938 opera_contig_191938_280 357522 358556 - EpsG
pfam opera_contig_191938 opera_contig_191938_281 358565 359713 - Epimerase_2
CAZyme opera_contig_191938 opera_contig_191938_282 359713 360738 - GT2
CAZyme opera_contig_191938 opera_contig_191938_283 360735 361718 - GT2
Gene ID: opera_contig_191938_276
Type: TC
Location: 354110 - 354736 (-)
Gene ID: opera_contig_191938_277
Type: CAZyme
Location: 354772 - 355524 (-)
Gene ID: opera_contig_191938_278
Type: CAZyme
Location: 355526 - 356398 (-)
Gene ID: opera_contig_191938_279
Type: CAZyme
Location: 356410 - 357519 (-)
Gene ID: opera_contig_191938_280
Type: pfam
Location: 357522 - 358556 (-)
Gene ID: opera_contig_191938_281
Type: pfam
Location: 358565 - 359713 (-)
Gene ID: opera_contig_191938_282
Type: CAZyme
Location: 359713 - 360738 (-)
Gene ID: opera_contig_191938_283
Type: CAZyme
Location: 360735 - 361718 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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