Cluster: SPMP06_bin.48_CGC38
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: SPMP06_bin.48
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_191938 | opera_contig_191938_93 | 117156 | 119411 | - | GT20 |
| TC | opera_contig_191938 | opera_contig_191938_94 | 119991 | 121697 | + | 3.A.3.7.2 |
| TC | opera_contig_191938 | opera_contig_191938_95 | 121703 | 123736 | + | 3.A.3.7.2 |
| TC | opera_contig_191938 | opera_contig_191938_96 | 123753 | 124328 | + | 3.A.3.7.2 |
| NULL(UNKNOWN) | opera_contig_191938 | opera_contig_191938_97 | 124357 | 125100 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | opera_contig_191938 | opera_contig_191938_98 | 125190 | 126320 | + | KdpD |
| TC | opera_contig_191938 | opera_contig_191938_99 | 126340 | 127779 | + | 2.A.21.9.1 |
| peptidase | opera_contig_191938 | opera_contig_191938_100 | 127881 | 129188 | + | C26.957 |
| CAZyme | opera_contig_191938 | opera_contig_191938_101 | 129283 | 130773 | - | PL9_2 |
| CAZyme | opera_contig_191938 | opera_contig_191938_102 | 130839 | 133160 | - | GH2 |
| pfam | opera_contig_191938 | opera_contig_191938_103 | 133507 | 135054 | - | SusD_RagB | SusD-like_3 |
| TC | opera_contig_191938 | opera_contig_191938_104 | 135068 | 138430 | - | 1.B.14.6.1 |
Gene ID: opera_contig_191938_93
Type: CAZyme
Location: 117156 - 119411 (-)
Type: CAZyme
Location: 117156 - 119411 (-)
Gene ID: opera_contig_191938_94
Type: TC
Location: 119991 - 121697 (+)
Type: TC
Location: 119991 - 121697 (+)
Gene ID: opera_contig_191938_95
Type: TC
Location: 121703 - 123736 (+)
Type: TC
Location: 121703 - 123736 (+)
Gene ID: opera_contig_191938_96
Type: TC
Location: 123753 - 124328 (+)
Type: TC
Location: 123753 - 124328 (+)
Gene ID: opera_contig_191938_97
Type:
Location: 124357 - 125100 (+)
Type:
Location: 124357 - 125100 (+)
Gene ID: opera_contig_191938_98
Type: pfam
Location: 125190 - 126320 (+)
Type: pfam
Location: 125190 - 126320 (+)
Gene ID: opera_contig_191938_99
Type: TC
Location: 126340 - 127779 (+)
Type: TC
Location: 126340 - 127779 (+)
Gene ID: opera_contig_191938_100
Type: peptidase
Location: 127881 - 129188 (+)
Type: peptidase
Location: 127881 - 129188 (+)
Gene ID: opera_contig_191938_101
Type: CAZyme
Location: 129283 - 130773 (-)
Type: CAZyme
Location: 129283 - 130773 (-)
Gene ID: opera_contig_191938_102
Type: CAZyme
Location: 130839 - 133160 (-)
Type: CAZyme
Location: 130839 - 133160 (-)
Gene ID: opera_contig_191938_103
Type: pfam
Location: 133507 - 135054 (-)
Type: pfam
Location: 133507 - 135054 (-)
Gene ID: opera_contig_191938_104
Type: TC
Location: 135068 - 138430 (-)
Type: TC
Location: 135068 - 138430 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides caccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_191938_103 | vegan > omnivore | 1.02391 | 0.01246 |