Cluster: SPMP06_bin.48_CGC23
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 9
- Substrate:
- Genome ID: SPMP06_bin.48
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_191937 | opera_contig_191937_30 | 29370 | 30989 | + | GH28 |
| pfam | opera_contig_191937 | opera_contig_191937_31 | 31148 | 32389 | + | DUF4861 |
| CAZyme | opera_contig_191937 | opera_contig_191937_32 | 32395 | 34071 | + | CBM91 | GH43_10 |
| pfam | opera_contig_191937 | opera_contig_191937_33 | 34199 | 34858 | + | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| CAZyme | opera_contig_191937 | opera_contig_191937_34 | 35107 | 39738 | - | GH95 | GH95 |
| CAZyme | opera_contig_191937 | opera_contig_191937_35 | 39753 | 41549 | - | GH120 |
| CAZyme | opera_contig_191937 | opera_contig_191937_36 | 41561 | 44020 | - | GH2 |
| CAZyme | opera_contig_191937 | opera_contig_191937_37 | 44052 | 46901 | - | CBM32 |
| CAZyme | opera_contig_191937 | opera_contig_191937_38 | 46951 | 48936 | - | GH38 |
| CAZyme | opera_contig_191937 | opera_contig_191937_39 | 48979 | 50565 | - | CBM91 | GH43_10 |
| CAZyme | opera_contig_191937 | opera_contig_191937_40 | 50581 | 53352 | - | GH35 |
| pfam | opera_contig_191937 | opera_contig_191937_41 | 53444 | 54322 | - | F5_F8_type_C | DUF4959 | F5_F8_type_C_2 |
| pfam | opera_contig_191937 | opera_contig_191937_42 | 54343 | 56148 | - | SusD_RagB | SusD-like_3 |
| TC | opera_contig_191937 | opera_contig_191937_43 | 56158 | 59610 | - | 1.B.14.6.1 |
Gene ID: opera_contig_191937_30
Type: CAZyme
Location: 29370 - 30989 (+)
Type: CAZyme
Location: 29370 - 30989 (+)
Gene ID: opera_contig_191937_31
Type: pfam
Location: 31148 - 32389 (+)
Type: pfam
Location: 31148 - 32389 (+)
Gene ID: opera_contig_191937_32
Type: CAZyme
Location: 32395 - 34071 (+)
Type: CAZyme
Location: 32395 - 34071 (+)
Gene ID: opera_contig_191937_33
Type: pfam
Location: 34199 - 34858 (+)
Type: pfam
Location: 34199 - 34858 (+)
Gene ID: opera_contig_191937_34
Type: CAZyme
Location: 35107 - 39738 (-)
Type: CAZyme
Location: 35107 - 39738 (-)
Gene ID: opera_contig_191937_35
Type: CAZyme
Location: 39753 - 41549 (-)
Type: CAZyme
Location: 39753 - 41549 (-)
Gene ID: opera_contig_191937_36
Type: CAZyme
Location: 41561 - 44020 (-)
Type: CAZyme
Location: 41561 - 44020 (-)
Gene ID: opera_contig_191937_37
Type: CAZyme
Location: 44052 - 46901 (-)
Type: CAZyme
Location: 44052 - 46901 (-)
Gene ID: opera_contig_191937_38
Type: CAZyme
Location: 46951 - 48936 (-)
Type: CAZyme
Location: 46951 - 48936 (-)
Gene ID: opera_contig_191937_39
Type: CAZyme
Location: 48979 - 50565 (-)
Type: CAZyme
Location: 48979 - 50565 (-)
Gene ID: opera_contig_191937_40
Type: CAZyme
Location: 50581 - 53352 (-)
Type: CAZyme
Location: 50581 - 53352 (-)
Gene ID: opera_contig_191937_41
Type: pfam
Location: 53444 - 54322 (-)
Type: pfam
Location: 53444 - 54322 (-)
Gene ID: opera_contig_191937_42
Type: pfam
Location: 54343 - 56148 (-)
Type: pfam
Location: 54343 - 56148 (-)
Gene ID: opera_contig_191937_43
Type: TC
Location: 56158 - 59610 (-)
Type: TC
Location: 56158 - 59610 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides caccae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.