Cluster: SPMP06_bin.115_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP06_bin.115
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_193821 | opera_contig_193821_57 | 58043 | 58561 | + | 3.A.7.14.1 |
| pfam | opera_contig_193821 | opera_contig_193821_58 | 62233 | 63519 | + | AAA_10 |
| NULL(UNKNOWN) | opera_contig_193821 | opera_contig_193821_59 | 63519 | 65729 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_193821 | opera_contig_193821_60 | 65726 | 66733 | + | GH23 |
Gene ID: opera_contig_193821_57
Type: TC
Location: 58043 - 58561 (+)
Type: TC
Location: 58043 - 58561 (+)
Gene ID: opera_contig_193821_58
Type: pfam
Location: 62233 - 63519 (+)
Type: pfam
Location: 62233 - 63519 (+)
Gene ID: opera_contig_193821_59
Type:
Location: 63519 - 65729 (+)
Type:
Location: 63519 - 65729 (+)
Gene ID: opera_contig_193821_60
Type: CAZyme
Location: 65726 - 66733 (+)
Type: CAZyme
Location: 65726 - 66733 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter torques
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.