Cluster: SPMP06_bin.115_CGC36
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP06_bin.115
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_193826 | opera_contig_193826_71 | 76533 | 78227 | + | 3.A.1.117.3 |
| pfam | opera_contig_193826 | opera_contig_193826_72 | 78217 | 79389 | + | NTP_transf_5 |
| NULL(UNKNOWN) | opera_contig_193826 | opera_contig_193826_73 | 79440 | 80396 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_193826 | opera_contig_193826_74 | 80979 | 85880 | + | GH20 |
| pfam | opera_contig_193826 | opera_contig_193826_75 | 85877 | 86524 | + | Gram_pos_anchor | Big_4 | Flg_new_2 |
| TC | opera_contig_193826 | opera_contig_193826_76 | 86664 | 87995 | - | 9.A.40.2.1 |
Gene ID: opera_contig_193826_71
Type: TC
Location: 76533 - 78227 (+)
Type: TC
Location: 76533 - 78227 (+)
Gene ID: opera_contig_193826_72
Type: pfam
Location: 78217 - 79389 (+)
Type: pfam
Location: 78217 - 79389 (+)
Gene ID: opera_contig_193826_73
Type:
Location: 79440 - 80396 (-)
Type:
Location: 79440 - 80396 (-)
Gene ID: opera_contig_193826_74
Type: CAZyme
Location: 80979 - 85880 (+)
Type: CAZyme
Location: 80979 - 85880 (+)
Gene ID: opera_contig_193826_75
Type: pfam
Location: 85877 - 86524 (+)
Type: pfam
Location: 85877 - 86524 (+)
Gene ID: opera_contig_193826_76
Type: TC
Location: 86664 - 87995 (-)
Type: TC
Location: 86664 - 87995 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter torques
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.