Cluster: SPMP06_bin.115_CGC34
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP06_bin.115
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_193825 | opera_contig_193825_164 | 197053 | 201582 | + | CBM32 | CBM40 | CBM40 | GH33 |
| TF | opera_contig_193825 | opera_contig_193825_165 | 201665 | 202654 | - | HTH_AraC |
| TC | opera_contig_193825 | opera_contig_193825_166 | 202882 | 204648 | + | 3.A.1.21.1 |
Gene ID: opera_contig_193825_164
Type: CAZyme
Location: 197053 - 201582 (+)
Type: CAZyme
Location: 197053 - 201582 (+)
Gene ID: opera_contig_193825_165
Type: TF
Location: 201665 - 202654 (-)
Type: TF
Location: 201665 - 202654 (-)
Gene ID: opera_contig_193825_166
Type: TC
Location: 202882 - 204648 (+)
Type: TC
Location: 202882 - 204648 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter torques
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.