Cluster: SPMP06_bin.115_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: SPMP06_bin.115
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_193820 | opera_contig_193820_115 | 144872 | 145813 | + | GT2 |
| pfam | opera_contig_193820 | opera_contig_193820_116 | 145806 | 146201 | + | GtrA_DPMS_TM |
| TC | opera_contig_193820 | opera_contig_193820_117 | 146376 | 147722 | + | 9.B.18.1.3 |
| CAZyme | opera_contig_193820 | opera_contig_193820_118 | 147722 | 148465 | + | GT26 |
| CAZyme | opera_contig_193820 | opera_contig_193820_119 | 148440 | 149690 | + | GT4 |
| CAZyme | opera_contig_193820 | opera_contig_193820_120 | 149680 | 150966 | + | GT4 |
Gene ID: opera_contig_193820_115
Type: CAZyme
Location: 144872 - 145813 (+)
Type: CAZyme
Location: 144872 - 145813 (+)
Gene ID: opera_contig_193820_116
Type: pfam
Location: 145806 - 146201 (+)
Type: pfam
Location: 145806 - 146201 (+)
Gene ID: opera_contig_193820_117
Type: TC
Location: 146376 - 147722 (+)
Type: TC
Location: 146376 - 147722 (+)
Gene ID: opera_contig_193820_118
Type: CAZyme
Location: 147722 - 148465 (+)
Type: CAZyme
Location: 147722 - 148465 (+)
Gene ID: opera_contig_193820_119
Type: CAZyme
Location: 148440 - 149690 (+)
Type: CAZyme
Location: 148440 - 149690 (+)
Gene ID: opera_contig_193820_120
Type: CAZyme
Location: 149680 - 150966 (+)
Type: CAZyme
Location: 149680 - 150966 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter torques
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.