Cluster: SPMP06_bin.115_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP06_bin.115
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_193821 | opera_contig_193821_553 | 606773 | 608506 | + | 3.A.1.135.5 |
| TC | opera_contig_193821 | opera_contig_193821_554 | 608499 | 610343 | + | 3.A.1.135.5 |
| STP | opera_contig_193821 | opera_contig_193821_555 | 610420 | 610923 | + | NUDIX |
| pfam | opera_contig_193821 | opera_contig_193821_556 | 611002 | 611517 | - | DUF6512 |
| CAZyme | opera_contig_193821 | opera_contig_193821_557 | 611703 | 617309 | + | GH123 | GH33 |
Gene ID: opera_contig_193821_553
Type: TC
Location: 606773 - 608506 (+)
Type: TC
Location: 606773 - 608506 (+)
Gene ID: opera_contig_193821_554
Type: TC
Location: 608499 - 610343 (+)
Type: TC
Location: 608499 - 610343 (+)
Gene ID: opera_contig_193821_555
Type: STP
Location: 610420 - 610923 (+)
Type: STP
Location: 610420 - 610923 (+)
Gene ID: opera_contig_193821_556
Type: pfam
Location: 611002 - 611517 (-)
Type: pfam
Location: 611002 - 611517 (-)
Gene ID: opera_contig_193821_557
Type: CAZyme
Location: 611703 - 617309 (+)
Type: CAZyme
Location: 611703 - 617309 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter torques
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.