Cluster: RoseG_2017_ERR1600432_bin.4_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: RoseG_2017_ERR1600432_bin.4
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RoseG_2017_ERR1600432_bin.4_k141_3145 | RoseG_2017_ERR1600432_bin.4_k141_3145_18 | 27797 | 28873 | - | 9.B.124.1.1 |
| NULL(UNKNOWN) | RoseG_2017_ERR1600432_bin.4_k141_3145 | RoseG_2017_ERR1600432_bin.4_k141_3145_19 | 28904 | 29695 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | RoseG_2017_ERR1600432_bin.4_k141_3145 | RoseG_2017_ERR1600432_bin.4_k141_3145_20 | 30204 | 30977 | - | 3.A.1.16.3 |
| TC | RoseG_2017_ERR1600432_bin.4_k141_3145 | RoseG_2017_ERR1600432_bin.4_k141_3145_21 | 30989 | 31741 | - | 3.A.1.17.1 |
| TC | RoseG_2017_ERR1600432_bin.4_k141_3145 | RoseG_2017_ERR1600432_bin.4_k141_3145_22 | 31752 | 32705 | - | 3.A.1.17.4 |
| CAZyme | RoseG_2017_ERR1600432_bin.4_k141_3145 | RoseG_2017_ERR1600432_bin.4_k141_3145_23 | 33119 | 34750 | - | GT83 |
| TC | RoseG_2017_ERR1600432_bin.4_k141_3145 | RoseG_2017_ERR1600432_bin.4_k141_3145_24 | 34762 | 35373 | - | 9.B.27.2.5 |
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3145_18
Type: TC
Location: 27797 - 28873 (-)
Type: TC
Location: 27797 - 28873 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3145_19
Type:
Location: 28904 - 29695 (-)
Type:
Location: 28904 - 29695 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3145_20
Type: TC
Location: 30204 - 30977 (-)
Type: TC
Location: 30204 - 30977 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3145_21
Type: TC
Location: 30989 - 31741 (-)
Type: TC
Location: 30989 - 31741 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3145_22
Type: TC
Location: 31752 - 32705 (-)
Type: TC
Location: 31752 - 32705 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3145_23
Type: CAZyme
Location: 33119 - 34750 (-)
Type: CAZyme
Location: 33119 - 34750 (-)
Gene ID: RoseG_2017_ERR1600432_bin.4_k141_3145_24
Type: TC
Location: 34762 - 35373 (-)
Type: TC
Location: 34762 - 35373 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.