PROTEIN: RoseG_2017_ERR1600432_bin.4_k141_3145_19
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Protein File & Metadata
Source:
RoseG_2017_ERR1600432_bin.4_k141_3145_19.pdb
Genome ID:
Protein ID:
RoseG_2017_ERR1600432_bin.4_k141_3145_19
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Protein Sequence
MSLFELEKSM SFDEYIASFD AERVEKVRGF VDWLAQYQGS LVHNPWGEVN PDLEIVTDGF 60 DAARVRRDNL VAYLLPRLGR AKVFVVAEAV GYQGGRFTGI AITCERMLLD KHKTIRAKDV 120 TSIRLERTSS PTSSLLKGTQ QKDGFNEPTD TVVWSAIVEK GIDPYDTLLW NIFPFHPHKE 180 GNALTNRTPT DKEQQLGWEY TKRLSELHLE LGGVEPLMLA VGQKSADTMG KFGLAAIGLR 240 HPANGGANLY RQGFAEAVDT YLK 263
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9VEM1-F1-model_v4 | 13 | 263 | 12 | 280 | 0.6491 |
0.7213 |
| AF-Q53HV7-F1-model_v4 | 20 | 263 | 24 | 266 | 0.6481 |
0.7306 |
| AF-Q811Q1-F1-model_v4 | 20 | 263 | 23 | 266 | 0.6425 |
0.7302 |
| AF-A0A2R8PW02-F1-model_v4 | 20 | 263 | 34 | 277 | 0.6381 |
0.7279 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5h93-assembly1.cif.gz_A | 26 | 263 | 1 | 232 | 0.6766 |
0.7431 |
| 5h93-assembly3.cif.gz_C | 26 | 263 | 1 | 230 | 0.676 |
0.7443 |
| 5h93-assembly2.cif.gz_B | 25 | 263 | 1 | 231 | 0.6745 |
0.7425 |
| 5h99-assembly2.cif.gz_B | 23 | 263 | 1 | 229 | 0.6711 |
0.7407 |
| 5h99-assembly1.cif.gz_A | 23 | 263 | 1 | 228 | 0.6708 |
0.7418 |
| 5h93-assembly4.cif.gz_D | 22 | 263 | 1 | 235 | 0.6614 |
0.7272 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q53HV7-F1-model_v4 | 20 | 263 | 24 | 266 | 0.6481 |
0.7306 |
| AF-Q59I47-F1-model_v4 | 20 | 263 | 25 | 270 | 0.6457 |
0.7269 |
| AF-Q811Q1-F1-model_v4 | 20 | 263 | 23 | 266 | 0.6425 |
0.7302 |
| AF-Q9YGN6-F1-model_v4 | 20 | 263 | 35 | 277 | 0.6347 |
0.7272 |