Cluster: Rep_996_CGC43
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 11
- Substrate:
- Genome ID: Rep_996
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_996_c_30 | Rep_996_c_30_45 | 46087 | 46863 | - | GT2 |
| CAZyme | Rep_996_c_30 | Rep_996_c_30_46 | 46863 | 48137 | - | GT30 |
| CAZyme | Rep_996_c_30 | Rep_996_c_30_47 | 48223 | 49356 | - | GT4 |
| CAZyme | Rep_996_c_30 | Rep_996_c_30_48 | 49349 | 50425 | - | GT9 |
| CAZyme | Rep_996_c_30 | Rep_996_c_30_49 | 50498 | 51496 | - | GT2 |
| CAZyme | Rep_996_c_30 | Rep_996_c_30_50 | 51493 | 52602 | - | GT9 |
| CAZyme | Rep_996_c_30 | Rep_996_c_30_51 | 52645 | 53787 | - | GT4 |
| NULL(UNKNOWN) | Rep_996_c_30 | Rep_996_c_30_52 | 54099 | 55076 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_996_c_30 | Rep_996_c_30_53 | 55059 | 56066 | - | GT2 |
| TC | Rep_996_c_30 | Rep_996_c_30_54 | 56066 | 57322 | - | 9.B.67.5.1 |
| CAZyme | Rep_996_c_30 | Rep_996_c_30_55 | 57312 | 58490 | - | GT4 |
| CAZyme | Rep_996_c_30 | Rep_996_c_30_56 | 58487 | 59455 | - | GT9 |
| CAZyme | Rep_996_c_30 | Rep_996_c_30_57 | 59443 | 60501 | - | GT9 |
Gene ID: Rep_996_c_30_45
Type: CAZyme
Location: 46087 - 46863 (-)
Type: CAZyme
Location: 46087 - 46863 (-)
Gene ID: Rep_996_c_30_46
Type: CAZyme
Location: 46863 - 48137 (-)
Type: CAZyme
Location: 46863 - 48137 (-)
Gene ID: Rep_996_c_30_47
Type: CAZyme
Location: 48223 - 49356 (-)
Type: CAZyme
Location: 48223 - 49356 (-)
Gene ID: Rep_996_c_30_48
Type: CAZyme
Location: 49349 - 50425 (-)
Type: CAZyme
Location: 49349 - 50425 (-)
Gene ID: Rep_996_c_30_49
Type: CAZyme
Location: 50498 - 51496 (-)
Type: CAZyme
Location: 50498 - 51496 (-)
Gene ID: Rep_996_c_30_50
Type: CAZyme
Location: 51493 - 52602 (-)
Type: CAZyme
Location: 51493 - 52602 (-)
Gene ID: Rep_996_c_30_51
Type: CAZyme
Location: 52645 - 53787 (-)
Type: CAZyme
Location: 52645 - 53787 (-)
Gene ID: Rep_996_c_30_52
Type:
Location: 54099 - 55076 (+)
Type:
Location: 54099 - 55076 (+)
Gene ID: Rep_996_c_30_53
Type: CAZyme
Location: 55059 - 56066 (-)
Type: CAZyme
Location: 55059 - 56066 (-)
Gene ID: Rep_996_c_30_54
Type: TC
Location: 56066 - 57322 (-)
Type: TC
Location: 56066 - 57322 (-)
Gene ID: Rep_996_c_30_55
Type: CAZyme
Location: 57312 - 58490 (-)
Type: CAZyme
Location: 57312 - 58490 (-)
Gene ID: Rep_996_c_30_56
Type: CAZyme
Location: 58487 - 59455 (-)
Type: CAZyme
Location: 58487 - 59455 (-)
Gene ID: Rep_996_c_30_57
Type: CAZyme
Location: 59443 - 60501 (-)
Type: CAZyme
Location: 59443 - 60501 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pantoea
Species
Pantoea septica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.