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Cluster: Rep_996_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_996_c_28 Rep_996_c_28_321 313156 313560 + 3.A.6.2.1
TC Rep_996_c_28 Rep_996_c_28_322 313563 313955 + 3.A.6.2.1
TC Rep_996_c_28 Rep_996_c_28_323 313952 314686 + 3.A.6.2.1
TC Rep_996_c_28 Rep_996_c_28_324 314712 314981 + 3.A.6.2.1
TC Rep_996_c_28 Rep_996_c_28_325 314981 315766 + 3.A.6.2.1
TF Rep_996_c_28 Rep_996_c_28_326 316402 317037 + GerE
TC Rep_996_c_28 Rep_996_c_28_327 317172 318884 + 1.B.52.2.1
pfam Rep_996_c_28 Rep_996_c_28_328 319011 319205 - DSRB
TC Rep_996_c_28 Rep_996_c_28_329 319260 319418 - 9.B.12.2.1
pfam Rep_996_c_28 Rep_996_c_28_330 319778 320011 + DUF2525
pfam Rep_996_c_28 Rep_996_c_28_331 320358 321146 + S6PP | Hydrolase_3
CAZyme Rep_996_c_28 Rep_996_c_28_332 321180 322400 + GT81
TC Rep_996_c_28 Rep_996_c_28_333 322397 324046 - 9.B.34.1.4
Gene ID: Rep_996_c_28_321
Type: TC
Location: 313156 - 313560 (+)
Gene ID: Rep_996_c_28_322
Type: TC
Location: 313563 - 313955 (+)
Gene ID: Rep_996_c_28_323
Type: TC
Location: 313952 - 314686 (+)
Gene ID: Rep_996_c_28_324
Type: TC
Location: 314712 - 314981 (+)
Gene ID: Rep_996_c_28_325
Type: TC
Location: 314981 - 315766 (+)
Gene ID: Rep_996_c_28_326
Type: TF
Location: 316402 - 317037 (+)
Gene ID: Rep_996_c_28_327
Type: TC
Location: 317172 - 318884 (+)
Gene ID: Rep_996_c_28_328
Type: pfam
Location: 319011 - 319205 (-)
Gene ID: Rep_996_c_28_329
Type: TC
Location: 319260 - 319418 (-)
Gene ID: Rep_996_c_28_330
Type: pfam
Location: 319778 - 320011 (+)
Gene ID: Rep_996_c_28_331
Type: pfam
Location: 320358 - 321146 (+)
Gene ID: Rep_996_c_28_332
Type: CAZyme
Location: 321180 - 322400 (+)
Gene ID: Rep_996_c_28_333
Type: TC
Location: 322397 - 324046 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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