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Cluster: Rep_996_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_996_c_28 Rep_996_c_28_262 256377 258053 - 1.B.52.2.1
TC Rep_996_c_28 Rep_996_c_28_263 258215 259873 - 1.B.52.2.1
TC Rep_996_c_28 Rep_996_c_28_264 260046 261722 - 1.B.52.2.1
STP Rep_996_c_28 Rep_996_c_28_265 261878 262375 - CheW
STP Rep_996_c_28 Rep_996_c_28_266 262398 264392 - CheW | CheY-binding | H-kinase_dim | HATPase_c
TC Rep_996_c_28 Rep_996_c_28_267 264397 265344 - 1.A.30.1.1
TC Rep_996_c_28 Rep_996_c_28_268 265341 266228 - 1.A.30.1.1
TF Rep_996_c_28 Rep_996_c_28_269 266362 266940 - FlhC
TF Rep_996_c_28 Rep_996_c_28_270 266941 267291 - FlhD
CAZyme Rep_996_c_28 Rep_996_c_28_271 268260 269696 - GT20
Gene ID: Rep_996_c_28_262
Type: TC
Location: 256377 - 258053 (-)
Gene ID: Rep_996_c_28_263
Type: TC
Location: 258215 - 259873 (-)
Gene ID: Rep_996_c_28_264
Type: TC
Location: 260046 - 261722 (-)
Gene ID: Rep_996_c_28_265
Type: STP
Location: 261878 - 262375 (-)
Gene ID: Rep_996_c_28_266
Type: STP
Location: 262398 - 264392 (-)
Gene ID: Rep_996_c_28_267
Type: TC
Location: 264397 - 265344 (-)
Gene ID: Rep_996_c_28_268
Type: TC
Location: 265341 - 266228 (-)
Gene ID: Rep_996_c_28_269
Type: TF
Location: 266362 - 266940 (-)
Gene ID: Rep_996_c_28_270
Type: TF
Location: 266941 - 267291 (-)
Gene ID: Rep_996_c_28_271
Type: CAZyme
Location: 268260 - 269696 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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