dbCAN Logo

Cluster: Rep_996_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_996_c_18 Rep_996_c_18_4 2935 4275 + 2.A.8.1.8
sulfatase Rep_996_c_18 Rep_996_c_18_5 4311 5051 - S1_7
TC Rep_996_c_18 Rep_996_c_18_6 5158 5751 - 2.A.95.1.5
pfam Rep_996_c_18 Rep_996_c_18_7 5969 7078 + Semialdhyde_dh | Semialdhyde_dhC
CAZyme Rep_996_c_18 Rep_996_c_18_8 7436 9619 + CBM48 | GH13_9
CAZyme Rep_996_c_18 Rep_996_c_18_9 9616 11592 + GH13_11
pfam Rep_996_c_18 Rep_996_c_18_10 11603 12889 + NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme Rep_996_c_18 Rep_996_c_18_11 12960 14393 + GT5
CAZyme Rep_996_c_18 Rep_996_c_18_12 14415 16862 + GT35
Gene ID: Rep_996_c_18_4
Type: TC
Location: 2935 - 4275 (+)
Gene ID: Rep_996_c_18_5
Type: sulfatase
Location: 4311 - 5051 (-)
Gene ID: Rep_996_c_18_6
Type: TC
Location: 5158 - 5751 (-)
Gene ID: Rep_996_c_18_7
Type: pfam
Location: 5969 - 7078 (+)
Gene ID: Rep_996_c_18_8
Type: CAZyme
Location: 7436 - 9619 (+)
Gene ID: Rep_996_c_18_9
Type: CAZyme
Location: 9616 - 11592 (+)
Gene ID: Rep_996_c_18_10
Type: pfam
Location: 11603 - 12889 (+)
Gene ID: Rep_996_c_18_11
Type: CAZyme
Location: 12960 - 14393 (+)
Gene ID: Rep_996_c_18_12
Type: CAZyme
Location: 14415 - 16862 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List