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Cluster: Rep_957_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_957_c_0 Rep_957_c_0_360 360924 362144 - GT4
pfam Rep_957_c_0 Rep_957_c_0_361 362141 363421 - PS_pyruv_trans
TC Rep_957_c_0 Rep_957_c_0_362 364368 365846 - 2.A.66.2.7
TC Rep_957_c_0 Rep_957_c_0_363 365848 367242 - 9.B.18.1.1
pfam Rep_957_c_0 Rep_957_c_0_364 367297 368667 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
pfam Rep_957_c_0 Rep_957_c_0_365 368824 370260 - NTP_transferase | MannoseP_isomer | Cupin_2 | NTP_transf_3 | ManC_GMP_beta-helix
CAZyme Rep_957_c_0 Rep_957_c_0_366 370263 371486 - GT4
Gene ID: Rep_957_c_0_360
Type: CAZyme
Location: 360924 - 362144 (-)
Gene ID: Rep_957_c_0_361
Type: pfam
Location: 362141 - 363421 (-)
Gene ID: Rep_957_c_0_362
Type: TC
Location: 364368 - 365846 (-)
Gene ID: Rep_957_c_0_363
Type: TC
Location: 365848 - 367242 (-)
Gene ID: Rep_957_c_0_364
Type: pfam
Location: 367297 - 368667 (-)
Gene ID: Rep_957_c_0_365
Type: pfam
Location: 368824 - 370260 (-)
Gene ID: Rep_957_c_0_366
Type: CAZyme
Location: 370263 - 371486 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_957_c_0_360 omnivore > vegetarian 2.16970 0.03394

🧭 Explore Read Mapping of CGC

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