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Cluster: Rep_957_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_957_c_0 Rep_957_c_0_289 289321 290511 + 1.B.1.1.21
peptidase Rep_957_c_0 Rep_957_c_0_290 291488 292339 + C56.UNW
CAZyme Rep_957_c_0 Rep_957_c_0_291 292644 293702 + GT9
peptidase Rep_957_c_0 Rep_957_c_0_292 293971 294768 - M90.001
TC Rep_957_c_0 Rep_957_c_0_293 295300 296616 + 2.A.1.6.6
pfam Rep_957_c_0 Rep_957_c_0_294 296718 297620 + AMNp_N
pfam Rep_957_c_0 Rep_957_c_0_295 297620 298171 + PNP_UDP_1
TC Rep_957_c_0 Rep_957_c_0_296 298440 300068 - 2.A.66.1.23
Gene ID: Rep_957_c_0_289
Type: TC
Location: 289321 - 290511 (+)
Gene ID: Rep_957_c_0_290
Type: peptidase
Location: 291488 - 292339 (+)
Gene ID: Rep_957_c_0_291
Type: CAZyme
Location: 292644 - 293702 (+)
Gene ID: Rep_957_c_0_292
Type: peptidase
Location: 293971 - 294768 (-)
Gene ID: Rep_957_c_0_293
Type: TC
Location: 295300 - 296616 (+)
Gene ID: Rep_957_c_0_294
Type: pfam
Location: 296718 - 297620 (+)
Gene ID: Rep_957_c_0_295
Type: pfam
Location: 297620 - 298171 (+)
Gene ID: Rep_957_c_0_296
Type: TC
Location: 298440 - 300068 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_957_c_0_294 omnivore > vegetarian 1.65477 0.03395
Rep_957_c_0_296 omnivore > vegetarian 1.32487 0.04692

🧭 Explore Read Mapping of CGC

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