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Cluster: Rep_957_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_957_c_35 Rep_957_c_35_9 11318 13378 + 9.B.121.1.1
TC Rep_957_c_35 Rep_957_c_35_10 13560 14882 - 2.A.1.6.10
TC Rep_957_c_35 Rep_957_c_35_11 15292 16305 - 9.B.126.1.1
TF Rep_957_c_35 Rep_957_c_35_12 16354 17325 - HTH_1
TF Rep_957_c_35 Rep_957_c_35_13 17772 18374 + GerE
CAZyme Rep_957_c_35 Rep_957_c_35_14 18426 20075 - GH37
Gene ID: Rep_957_c_35_9
Type: TC
Location: 11318 - 13378 (+)
Gene ID: Rep_957_c_35_10
Type: TC
Location: 13560 - 14882 (-)
Gene ID: Rep_957_c_35_11
Type: TC
Location: 15292 - 16305 (-)
Gene ID: Rep_957_c_35_12
Type: TF
Location: 16354 - 17325 (-)
Gene ID: Rep_957_c_35_13
Type: TF
Location: 17772 - 18374 (+)
Gene ID: Rep_957_c_35_14
Type: CAZyme
Location: 18426 - 20075 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_957_c_35_12 omnivore > vegetarian 1.42430 0.03394

🧭 Explore Read Mapping of CGC

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