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Cluster: Rep_957_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_957_c_11 Rep_957_c_11_78 87855 90365 + GT51
TC Rep_957_c_11 Rep_957_c_11_79 90591 92834 + 1.B.14.1.2
TC Rep_957_c_11 Rep_957_c_11_80 92884 93681 + 3.A.1.14.3
TC Rep_957_c_11 Rep_957_c_11_81 93681 94571 + 3.A.1.14.3
TC Rep_957_c_11 Rep_957_c_11_82 94568 96550 + 3.A.1.14.3
pfam Rep_957_c_11 Rep_957_c_11_83 96585 97865 - Aminotran_3
TC Rep_957_c_11 Rep_957_c_11_84 98090 99511 + 2.A.49.5.1
pfam Rep_957_c_11 Rep_957_c_11_85 99593 99937 + Fe-S_biosyn
TC Rep_957_c_11 Rep_957_c_11_86 99982 100605 - 1.A.62.2.2
TC Rep_957_c_11 Rep_957_c_11_87 100643 101443 - 3.A.1.13.1
Gene ID: Rep_957_c_11_78
Type: CAZyme
Location: 87855 - 90365 (+)
Gene ID: Rep_957_c_11_79
Type: TC
Location: 90591 - 92834 (+)
Gene ID: Rep_957_c_11_80
Type: TC
Location: 92884 - 93681 (+)
Gene ID: Rep_957_c_11_81
Type: TC
Location: 93681 - 94571 (+)
Gene ID: Rep_957_c_11_82
Type: TC
Location: 94568 - 96550 (+)
Gene ID: Rep_957_c_11_83
Type: pfam
Location: 96585 - 97865 (-)
Gene ID: Rep_957_c_11_84
Type: TC
Location: 98090 - 99511 (+)
Gene ID: Rep_957_c_11_85
Type: pfam
Location: 99593 - 99937 (+)
Gene ID: Rep_957_c_11_86
Type: TC
Location: 99982 - 100605 (-)
Gene ID: Rep_957_c_11_87
Type: TC
Location: 100643 - 101443 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_957_c_11_86 omnivore > vegetarian 1.31390 0.03920
Rep_957_c_11_87 omnivore > vegetarian 1.40540 0.03395

🧭 Explore Read Mapping of CGC

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