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Cluster: Rep_957_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_957_c_11 Rep_957_c_11_49 57877 58185 - 8.A.2.1.3
CAZyme Rep_957_c_11 Rep_957_c_11_50 58390 59940 + AA1
pfam Rep_957_c_11 Rep_957_c_11_51 59987 62377 - PQQ | PQQ | PQQ | PQQ | PQQ | PQQ | PQQ_2 | PQQ_2
STP Rep_957_c_11 Rep_957_c_11_52 62583 63119 + Pribosyltran
TC Rep_957_c_11 Rep_957_c_11_53 63160 63822 - 2.A.53.3.8
TC Rep_957_c_11 Rep_957_c_11_54 63931 64857 + 3.A.1.105.17
TC Rep_957_c_11 Rep_957_c_11_55 64854 65624 + 3.A.1.105.17
pfam Rep_957_c_11 Rep_957_c_11_56 65729 66169 + EIIA-man
CAZyme Rep_957_c_11 Rep_957_c_11_57 66226 67452 + CE4
Gene ID: Rep_957_c_11_49
Type: TC
Location: 57877 - 58185 (-)
Gene ID: Rep_957_c_11_50
Type: CAZyme
Location: 58390 - 59940 (+)
Gene ID: Rep_957_c_11_51
Type: pfam
Location: 59987 - 62377 (-)
Gene ID: Rep_957_c_11_52
Type: STP
Location: 62583 - 63119 (+)
Gene ID: Rep_957_c_11_53
Type: TC
Location: 63160 - 63822 (-)
Gene ID: Rep_957_c_11_54
Type: TC
Location: 63931 - 64857 (+)
Gene ID: Rep_957_c_11_55
Type: TC
Location: 64854 - 65624 (+)
Gene ID: Rep_957_c_11_56
Type: pfam
Location: 65729 - 66169 (+)
Gene ID: Rep_957_c_11_57
Type: CAZyme
Location: 66226 - 67452 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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