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Cluster: Rep_957_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_957_c_5 Rep_957_c_5_186 174541 176352 + GH2
TC Rep_957_c_5 Rep_957_c_5_187 176349 176444 + 2.A.2.3.1
TC Rep_957_c_5 Rep_957_c_5_188 176441 177721 + 2.A.2.3.1
TC Rep_957_c_5 Rep_957_c_5_189 177760 179025 + 1.B.25.1.5
Gene ID: Rep_957_c_5_186
Type: CAZyme
Location: 174541 - 176352 (+)
Gene ID: Rep_957_c_5_187
Type: TC
Location: 176349 - 176444 (+)
Gene ID: Rep_957_c_5_188
Type: TC
Location: 176441 - 177721 (+)
Gene ID: Rep_957_c_5_189
Type: TC
Location: 177760 - 179025 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_957_c_5_188 omnivore > vegetarian 1.55411 0.03449
Rep_957_c_5_189 omnivore > vegetarian 1.30945 0.04290

🧭 Explore Read Mapping of CGC

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