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Cluster: Rep_957_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_957_c_3 Rep_957_c_3_120 118600 119604 - 3.A.1.2.25
TC Rep_957_c_3 Rep_957_c_3_121 119591 120613 - 3.A.1.2.25
TC Rep_957_c_3 Rep_957_c_3_122 120627 122129 - 3.A.1.2.25
TC Rep_957_c_3 Rep_957_c_3_123 122265 123221 - 3.A.1.2.25
sulfatase Rep_957_c_3 Rep_957_c_3_124 123530 124060 + S1_4
TC Rep_957_c_3 Rep_957_c_3_125 124572 126452 + 4.A.1.2.11
CAZyme Rep_957_c_3 Rep_957_c_3_126 126449 127873 + GH1
pfam Rep_957_c_3 Rep_957_c_3_127 127870 128709 + PRD | PRD | CAT_RBD
pfam Rep_957_c_3 Rep_957_c_3_128 128992 129336 - GGACT
TC Rep_957_c_3 Rep_957_c_3_129 129339 133118 - 9.B.22.1.2
TC Rep_957_c_3 Rep_957_c_3_130 133115 134848 - 1.B.33.2.4
pfam Rep_957_c_3 Rep_957_c_3_131 135054 135692 + PMSR
TC Rep_957_c_3 Rep_957_c_3_132 135880 137229 + 9.A.40.2.2
Gene ID: Rep_957_c_3_120
Type: TC
Location: 118600 - 119604 (-)
Gene ID: Rep_957_c_3_121
Type: TC
Location: 119591 - 120613 (-)
Gene ID: Rep_957_c_3_122
Type: TC
Location: 120627 - 122129 (-)
Gene ID: Rep_957_c_3_123
Type: TC
Location: 122265 - 123221 (-)
Gene ID: Rep_957_c_3_124
Type: sulfatase
Location: 123530 - 124060 (+)
Gene ID: Rep_957_c_3_125
Type: TC
Location: 124572 - 126452 (+)
Gene ID: Rep_957_c_3_126
Type: CAZyme
Location: 126449 - 127873 (+)
Gene ID: Rep_957_c_3_127
Type: pfam
Location: 127870 - 128709 (+)
Gene ID: Rep_957_c_3_128
Type: pfam
Location: 128992 - 129336 (-)
Gene ID: Rep_957_c_3_129
Type: TC
Location: 129339 - 133118 (-)
Gene ID: Rep_957_c_3_130
Type: TC
Location: 133115 - 134848 (-)
Gene ID: Rep_957_c_3_131
Type: pfam
Location: 135054 - 135692 (+)
Gene ID: Rep_957_c_3_132
Type: TC
Location: 135880 - 137229 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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