Cluster: Rep_957_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_957
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_957_c_3 | Rep_957_c_3_106 | 101799 | 104495 | - | 3.A.3.4.1 |
| TF | Rep_957_c_3 | Rep_957_c_3_107 | 104865 | 105812 | + | LacI |
| TC | Rep_957_c_3 | Rep_957_c_3_108 | 105934 | 107352 | + | 4.A.1.2.4 |
| CAZyme | Rep_957_c_3 | Rep_957_c_3_109 | 107402 | 109057 | + | GH13_29 |
Gene ID: Rep_957_c_3_106
Type: TC
Location: 101799 - 104495 (-)
Type: TC
Location: 101799 - 104495 (-)
Gene ID: Rep_957_c_3_107
Type: TF
Location: 104865 - 105812 (+)
Type: TF
Location: 104865 - 105812 (+)
Gene ID: Rep_957_c_3_108
Type: TC
Location: 105934 - 107352 (+)
Type: TC
Location: 105934 - 107352 (+)
Gene ID: Rep_957_c_3_109
Type: CAZyme
Location: 107402 - 109057 (+)
Type: CAZyme
Location: 107402 - 109057 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Species
Escherichia marmotae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.