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Cluster: Rep_957_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_957_c_2 Rep_957_c_2_20 22268 23041 - 9.B.52.1.1
pfam Rep_957_c_2 Rep_957_c_2_21 23043 23567 - Hexapep
CAZyme Rep_957_c_2 Rep_957_c_2_22 23602 24798 - GT2
STP Rep_957_c_2 Rep_957_c_2_23 24808 25479 - PIG-L
TC Rep_957_c_2 Rep_957_c_2_24 26102 27064 + 3.A.1.17.1
TC Rep_957_c_2 Rep_957_c_2_25 27077 27844 + 3.A.1.17.1
TC Rep_957_c_2 Rep_957_c_2_26 27841 28668 + 3.A.1.17.1
sulfatase Rep_957_c_2 Rep_957_c_2_27 28665 29516 + S2
pfam Rep_957_c_2 Rep_957_c_2_28 29557 30531 - ALAD
TC Rep_957_c_2 Rep_957_c_2_29 31059 34076 + 1.B.12.2.7
Gene ID: Rep_957_c_2_20
Type: TC
Location: 22268 - 23041 (-)
Gene ID: Rep_957_c_2_21
Type: pfam
Location: 23043 - 23567 (-)
Gene ID: Rep_957_c_2_22
Type: CAZyme
Location: 23602 - 24798 (-)
Gene ID: Rep_957_c_2_23
Type: STP
Location: 24808 - 25479 (-)
Gene ID: Rep_957_c_2_24
Type: TC
Location: 26102 - 27064 (+)
Gene ID: Rep_957_c_2_25
Type: TC
Location: 27077 - 27844 (+)
Gene ID: Rep_957_c_2_26
Type: TC
Location: 27841 - 28668 (+)
Gene ID: Rep_957_c_2_27
Type: sulfatase
Location: 28665 - 29516 (+)
Gene ID: Rep_957_c_2_28
Type: pfam
Location: 29557 - 30531 (-)
Gene ID: Rep_957_c_2_29
Type: TC
Location: 31059 - 34076 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_957_c_2_20 omnivore > vegetarian 1.68337 0.03395
Rep_957_c_2_22 omnivore > vegetarian 2.71998 0.03111
Rep_957_c_2_28 omnivore > vegetarian 1.17734 0.03395

🧭 Explore Read Mapping of CGC

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