dbCAN Logo

Cluster: Rep_842_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_842_c_0 Rep_842_c_0_399 505738 506868 - GH172
TF Rep_842_c_0 Rep_842_c_0_400 507028 508059 - LacI
TC Rep_842_c_0 Rep_842_c_0_401 508324 509172 - 9.B.36.1.3
CAZyme Rep_842_c_0 Rep_842_c_0_402 509351 512500 - GH2
TC Rep_842_c_0 Rep_842_c_0_403 512856 515933 + 3.A.3.2.21
pfam Rep_842_c_0 Rep_842_c_0_404 516125 516706 + dUTPase | DCD_N | DCD_C | DCD
peptidase Rep_842_c_0 Rep_842_c_0_405 516711 517493 - S09.UPW
TC Rep_842_c_0 Rep_842_c_0_406 517856 519940 - 2.A.36.3.2
CAZyme Rep_842_c_0 Rep_842_c_0_407 520662 522956 + GH36
pfam Rep_842_c_0 Rep_842_c_0_408 523029 524255 - ROK
STP Rep_842_c_0 Rep_842_c_0_409 524393 525733 + SBP_bac_1
TC Rep_842_c_0 Rep_842_c_0_410 525748 526680 + 3.A.1.1.28
TC Rep_842_c_0 Rep_842_c_0_411 526699 527589 + 3.A.1.1.28
CAZyme Rep_842_c_0 Rep_842_c_0_412 527907 529727 + GH13_31
Gene ID: Rep_842_c_0_399
Type: CAZyme
Location: 505738 - 506868 (-)
Gene ID: Rep_842_c_0_400
Type: TF
Location: 507028 - 508059 (-)
Gene ID: Rep_842_c_0_401
Type: TC
Location: 508324 - 509172 (-)
Gene ID: Rep_842_c_0_402
Type: CAZyme
Location: 509351 - 512500 (-)
Gene ID: Rep_842_c_0_403
Type: TC
Location: 512856 - 515933 (+)
Gene ID: Rep_842_c_0_404
Type: pfam
Location: 516125 - 516706 (+)
Gene ID: Rep_842_c_0_405
Type: peptidase
Location: 516711 - 517493 (-)
Gene ID: Rep_842_c_0_406
Type: TC
Location: 517856 - 519940 (-)
Gene ID: Rep_842_c_0_407
Type: CAZyme
Location: 520662 - 522956 (+)
Gene ID: Rep_842_c_0_408
Type: pfam
Location: 523029 - 524255 (-)
Gene ID: Rep_842_c_0_409
Type: STP
Location: 524393 - 525733 (+)
Gene ID: Rep_842_c_0_410
Type: TC
Location: 525748 - 526680 (+)
Gene ID: Rep_842_c_0_411
Type: TC
Location: 526699 - 527589 (+)
Gene ID: Rep_842_c_0_412
Type: CAZyme
Location: 527907 - 529727 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List