Cluster: Rep_842_CGC6
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_842
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_842_c_0 | Rep_842_c_0_375 | 471023 | 474094 | - | GH2 |
| TC | Rep_842_c_0 | Rep_842_c_0_376 | 474420 | 475946 | + | 2.A.2.2.3 |
| NULL(UNKNOWN) | Rep_842_c_0 | Rep_842_c_0_377 | 476202 | 476324 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_842_c_0 | Rep_842_c_0_378 | 477295 | 477480 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_842_c_0 | Rep_842_c_0_379 | 478197 | 480269 | - | GH42 |
| CAZyme | Rep_842_c_0 | Rep_842_c_0_380 | 480311 | 481930 | - | CE9 |
| NULL(UNKNOWN) | Rep_842_c_0 | Rep_842_c_0_381 | 482165 | 482599 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_842_c_0 | Rep_842_c_0_382 | 483088 | 485613 | - | GH31_15 |
| NULL(UNKNOWN) | Rep_842_c_0 | Rep_842_c_0_383 | 485698 | 485940 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_842_c_0 | Rep_842_c_0_384 | 486366 | 488801 | + | GH3 |
Gene ID: Rep_842_c_0_375
Type: CAZyme
Location: 471023 - 474094 (-)
Type: CAZyme
Location: 471023 - 474094 (-)
Gene ID: Rep_842_c_0_376
Type: TC
Location: 474420 - 475946 (+)
Type: TC
Location: 474420 - 475946 (+)
Gene ID: Rep_842_c_0_377
Type:
Location: 476202 - 476324 (+)
Type:
Location: 476202 - 476324 (+)
Gene ID: Rep_842_c_0_378
Type:
Location: 477295 - 477480 (-)
Type:
Location: 477295 - 477480 (-)
Gene ID: Rep_842_c_0_379
Type: CAZyme
Location: 478197 - 480269 (-)
Type: CAZyme
Location: 478197 - 480269 (-)
Gene ID: Rep_842_c_0_380
Type: CAZyme
Location: 480311 - 481930 (-)
Type: CAZyme
Location: 480311 - 481930 (-)
Gene ID: Rep_842_c_0_381
Type:
Location: 482165 - 482599 (-)
Type:
Location: 482165 - 482599 (-)
Gene ID: Rep_842_c_0_382
Type: CAZyme
Location: 483088 - 485613 (-)
Type: CAZyme
Location: 483088 - 485613 (-)
Gene ID: Rep_842_c_0_383
Type:
Location: 485698 - 485940 (-)
Type:
Location: 485698 - 485940 (-)
Gene ID: Rep_842_c_0_384
Type: CAZyme
Location: 486366 - 488801 (+)
Type: CAZyme
Location: 486366 - 488801 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium adolescentis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.