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Cluster: Rep_842_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_842_c_0 Rep_842_c_0_270 324019 325548 + 2.A.3.1.3
CAZyme Rep_842_c_0 Rep_842_c_0_271 325699 327546 - CE20
pfam Rep_842_c_0 Rep_842_c_0_272 327911 328951 + KARI_C | 2-Hacid_dh_C | NAD_binding_2 | F420_oxidored | KARI_N
pfam Rep_842_c_0 Rep_842_c_0_273 329148 330200 - KARI_C | 2-Hacid_dh_C | NAD_binding_2 | F420_oxidored | KARI_N
TC Rep_842_c_0 Rep_842_c_0_274 330486 331835 - 2.A.1.6.10
TC Rep_842_c_0 Rep_842_c_0_275 332314 333906 - 2.A.1.2.93
CAZyme Rep_842_c_0 Rep_842_c_0_276 334198 335712 - GH13_18
Gene ID: Rep_842_c_0_270
Type: TC
Location: 324019 - 325548 (+)
Gene ID: Rep_842_c_0_271
Type: CAZyme
Location: 325699 - 327546 (-)
Gene ID: Rep_842_c_0_272
Type: pfam
Location: 327911 - 328951 (+)
Gene ID: Rep_842_c_0_273
Type: pfam
Location: 329148 - 330200 (-)
Gene ID: Rep_842_c_0_274
Type: TC
Location: 330486 - 331835 (-)
Gene ID: Rep_842_c_0_275
Type: TC
Location: 332314 - 333906 (-)
Gene ID: Rep_842_c_0_276
Type: CAZyme
Location: 334198 - 335712 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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