Cluster: Rep_842_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_842
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_842_c_0 | Rep_842_c_0_1755 | 2132423 | 2134369 | - | CE20 | CE20 |
| CAZyme | Rep_842_c_0 | Rep_842_c_0_1756 | 2134460 | 2136091 | - | CBM91 | GH43_11 |
| TC | Rep_842_c_0 | Rep_842_c_0_1757 | 2136168 | 2137061 | - | 3.A.1.1.18 |
| TC | Rep_842_c_0 | Rep_842_c_0_1758 | 2137061 | 2138104 | - | 3.A.1.1.7 |
| TC | Rep_842_c_0 | Rep_842_c_0_1759 | 2138290 | 2139480 | - | 3.A.1.1.21 |
| TF | Rep_842_c_0 | Rep_842_c_0_1760 | 2139840 | 2140859 | + | LacI |
| CAZyme | Rep_842_c_0 | Rep_842_c_0_1761 | 2140995 | 2142692 | - | GH43_12 |
Gene ID: Rep_842_c_0_1755
Type: CAZyme
Location: 2132423 - 2134369 (-)
Type: CAZyme
Location: 2132423 - 2134369 (-)
Gene ID: Rep_842_c_0_1756
Type: CAZyme
Location: 2134460 - 2136091 (-)
Type: CAZyme
Location: 2134460 - 2136091 (-)
Gene ID: Rep_842_c_0_1757
Type: TC
Location: 2136168 - 2137061 (-)
Type: TC
Location: 2136168 - 2137061 (-)
Gene ID: Rep_842_c_0_1758
Type: TC
Location: 2137061 - 2138104 (-)
Type: TC
Location: 2137061 - 2138104 (-)
Gene ID: Rep_842_c_0_1759
Type: TC
Location: 2138290 - 2139480 (-)
Type: TC
Location: 2138290 - 2139480 (-)
Gene ID: Rep_842_c_0_1760
Type: TF
Location: 2139840 - 2140859 (+)
Type: TF
Location: 2139840 - 2140859 (+)
Gene ID: Rep_842_c_0_1761
Type: CAZyme
Location: 2140995 - 2142692 (-)
Type: CAZyme
Location: 2140995 - 2142692 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium adolescentis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.