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Cluster: Rep_842_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_842_c_0 Rep_842_c_0_1725 2097382 2099139 - GH13_30
TF Rep_842_c_0 Rep_842_c_0_1726 2099471 2100505 + LacI
STP Rep_842_c_0 Rep_842_c_0_1727 2100669 2102195 - CBS | CBS
TC Rep_842_c_0 Rep_842_c_0_1728 2102364 2103542 - 9.B.146.1.1
pfam Rep_842_c_0 Rep_842_c_0_1729 2103539 2104201 - Sua5_yciO_yrdC
TC Rep_842_c_0 Rep_842_c_0_1730 2104359 2105063 - 3.A.1.4.10
TC Rep_842_c_0 Rep_842_c_0_1731 2105063 2105875 - 3.A.1.4.10
TC Rep_842_c_0 Rep_842_c_0_1732 2105872 2106993 - 3.A.1.4.10
TC Rep_842_c_0 Rep_842_c_0_1733 2106998 2107924 - 3.A.1.4.10
TC Rep_842_c_0 Rep_842_c_0_1734 2108099 2109295 - 3.A.1.4.10
Gene ID: Rep_842_c_0_1725
Type: CAZyme
Location: 2097382 - 2099139 (-)
Gene ID: Rep_842_c_0_1726
Type: TF
Location: 2099471 - 2100505 (+)
Gene ID: Rep_842_c_0_1727
Type: STP
Location: 2100669 - 2102195 (-)
Gene ID: Rep_842_c_0_1728
Type: TC
Location: 2102364 - 2103542 (-)
Gene ID: Rep_842_c_0_1729
Type: pfam
Location: 2103539 - 2104201 (-)
Gene ID: Rep_842_c_0_1730
Type: TC
Location: 2104359 - 2105063 (-)
Gene ID: Rep_842_c_0_1731
Type: TC
Location: 2105063 - 2105875 (-)
Gene ID: Rep_842_c_0_1732
Type: TC
Location: 2105872 - 2106993 (-)
Gene ID: Rep_842_c_0_1733
Type: TC
Location: 2106998 - 2107924 (-)
Gene ID: Rep_842_c_0_1734
Type: TC
Location: 2108099 - 2109295 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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