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Cluster: Rep_842_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_842_c_0 Rep_842_c_0_193 221841 224144 + GT51
CAZyme Rep_842_c_0 Rep_842_c_0_194 224266 225330 - GH43_22
NULL(UNKNOWN) Rep_842_c_0 Rep_842_c_0_195 225463 225936 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_842_c_0 Rep_842_c_0_196 226053 226949 - 3.A.1.1.36
TC Rep_842_c_0 Rep_842_c_0_197 226952 227866 - 3.A.1.1.49
STP Rep_842_c_0 Rep_842_c_0_198 227866 229137 - SBP_bac_1
CAZyme Rep_842_c_0 Rep_842_c_0_199 229356 230375 - GH43_26
TF Rep_842_c_0 Rep_842_c_0_200 230715 231788 - LacI
CAZyme Rep_842_c_0 Rep_842_c_0_201 231816 233930 - GH43_27
Gene ID: Rep_842_c_0_193
Type: CAZyme
Location: 221841 - 224144 (+)
Gene ID: Rep_842_c_0_194
Type: CAZyme
Location: 224266 - 225330 (-)
Gene ID: Rep_842_c_0_195
Type:
Location: 225463 - 225936 (-)
Gene ID: Rep_842_c_0_196
Type: TC
Location: 226053 - 226949 (-)
Gene ID: Rep_842_c_0_197
Type: TC
Location: 226952 - 227866 (-)
Gene ID: Rep_842_c_0_198
Type: STP
Location: 227866 - 229137 (-)
Gene ID: Rep_842_c_0_199
Type: CAZyme
Location: 229356 - 230375 (-)
Gene ID: Rep_842_c_0_200
Type: TF
Location: 230715 - 231788 (-)
Gene ID: Rep_842_c_0_201
Type: CAZyme
Location: 231816 - 233930 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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