Cluster: Rep_842_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_842
- CGC Family ID: CGCFAM_02069
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_842_c_0 | Rep_842_c_0_545 | 725168 | 725734 | - | 2.A.107.1.2 |
| sulfatase | Rep_842_c_0 | Rep_842_c_0_546 | 726049 | 726543 | - | S1_4 |
| CAZyme | Rep_842_c_0 | Rep_842_c_0_547 | 726982 | 729240 | - | GH13_3 |
| pfam | Rep_842_c_0 | Rep_842_c_0_548 | 729654 | 730481 | + | Phage_integrase |
| TC | Rep_842_c_0 | Rep_842_c_0_549 | 730478 | 730828 | - | 1.E.31.1.3 |
Gene ID: Rep_842_c_0_545
Type: TC
Location: 725168 - 725734 (-)
Type: TC
Location: 725168 - 725734 (-)
Gene ID: Rep_842_c_0_546
Type: sulfatase
Location: 726049 - 726543 (-)
Type: sulfatase
Location: 726049 - 726543 (-)
Gene ID: Rep_842_c_0_547
Type: CAZyme
Location: 726982 - 729240 (-)
Type: CAZyme
Location: 726982 - 729240 (-)
Gene ID: Rep_842_c_0_548
Type: pfam
Location: 729654 - 730481 (+)
Type: pfam
Location: 729654 - 730481 (+)
Gene ID: Rep_842_c_0_549
Type: TC
Location: 730478 - 730828 (-)
Type: TC
Location: 730478 - 730828 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium adolescentis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.