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Cluster: Rep_790_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_790_c_2 Rep_790_c_2_2 710 1960 - CBM50
NULL(UNKNOWN) Rep_790_c_2 Rep_790_c_2_3 2194 2493 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_790_c_2 Rep_790_c_2_4 2831 4492 + 2.A.53.3.9
TC Rep_790_c_2 Rep_790_c_2_5 4927 6303 + 9.A.5.1.1
pfam Rep_790_c_2 Rep_790_c_2_6 6594 7061 + Oxidored_molyb
TC Rep_790_c_2 Rep_790_c_2_7 7058 8158 + 9.B.34.1.1
TC Rep_790_c_2 Rep_790_c_2_8 8205 8960 - 3.A.1.7.5
TC Rep_790_c_2 Rep_790_c_2_9 8989 9852 - 3.A.1.7.5
TC Rep_790_c_2 Rep_790_c_2_10 9858 10778 - 3.A.1.7.5
STP Rep_790_c_2 Rep_790_c_2_11 10856 11677 - SBP_bac_1
TC Rep_790_c_2 Rep_790_c_2_12 12048 13691 + 1.B.52.2.1
Gene ID: Rep_790_c_2_2
Type: CAZyme
Location: 710 - 1960 (-)
Gene ID: Rep_790_c_2_3
Type:
Location: 2194 - 2493 (-)
Gene ID: Rep_790_c_2_4
Type: TC
Location: 2831 - 4492 (+)
Gene ID: Rep_790_c_2_5
Type: TC
Location: 4927 - 6303 (+)
Gene ID: Rep_790_c_2_6
Type: pfam
Location: 6594 - 7061 (+)
Gene ID: Rep_790_c_2_7
Type: TC
Location: 7058 - 8158 (+)
Gene ID: Rep_790_c_2_8
Type: TC
Location: 8205 - 8960 (-)
Gene ID: Rep_790_c_2_9
Type: TC
Location: 8989 - 9852 (-)
Gene ID: Rep_790_c_2_10
Type: TC
Location: 9858 - 10778 (-)
Gene ID: Rep_790_c_2_11
Type: STP
Location: 10856 - 11677 (-)
Gene ID: Rep_790_c_2_12
Type: TC
Location: 12048 - 13691 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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