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Cluster: Rep_790_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_790_c_1 Rep_790_c_1_165 205273 207156 - 1.B.52.2.1
pfam Rep_790_c_1 Rep_790_c_1_166 207561 209198 + MdoG
CAZyme Rep_790_c_1 Rep_790_c_1_167 209217 211382 + GT2
TF Rep_790_c_1 Rep_790_c_1_168 211528 212550 - LacI
pfam Rep_790_c_1 Rep_790_c_1_169 212651 213409 - YdjC
CAZyme Rep_790_c_1 Rep_790_c_1_170 213432 214754 - GH4
TC Rep_790_c_1 Rep_790_c_1_171 214736 215071 - 4.A.3.2.6
TC Rep_790_c_1 Rep_790_c_1_172 215118 216449 - 4.A.3.2.6
TC Rep_790_c_1 Rep_790_c_1_173 216537 216842 - 4.A.3.2.6
CAZyme Rep_790_c_1 Rep_790_c_1_174 217097 218380 + CBM12 | CBM12 | CE4
TC Rep_790_c_1 Rep_790_c_1_175 218545 220149 - 2.A.15.1.5
Gene ID: Rep_790_c_1_165
Type: TC
Location: 205273 - 207156 (-)
Gene ID: Rep_790_c_1_166
Type: pfam
Location: 207561 - 209198 (+)
Gene ID: Rep_790_c_1_167
Type: CAZyme
Location: 209217 - 211382 (+)
Gene ID: Rep_790_c_1_168
Type: TF
Location: 211528 - 212550 (-)
Gene ID: Rep_790_c_1_169
Type: pfam
Location: 212651 - 213409 (-)
Gene ID: Rep_790_c_1_170
Type: CAZyme
Location: 213432 - 214754 (-)
Gene ID: Rep_790_c_1_171
Type: TC
Location: 214736 - 215071 (-)
Gene ID: Rep_790_c_1_172
Type: TC
Location: 215118 - 216449 (-)
Gene ID: Rep_790_c_1_173
Type: TC
Location: 216537 - 216842 (-)
Gene ID: Rep_790_c_1_174
Type: CAZyme
Location: 217097 - 218380 (+)
Gene ID: Rep_790_c_1_175
Type: TC
Location: 218545 - 220149 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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