dbCAN Logo

Cluster: Rep_790_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_790_c_1 Rep_790_c_1_36 44921 45721 - GH73
NULL(UNKNOWN) Rep_790_c_1 Rep_790_c_1_37 45714 46520 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_790_c_1 Rep_790_c_1_38 46845 47978 + 3.A.1.11.1
TC Rep_790_c_1 Rep_790_c_1_39 47959 48819 + 3.A.1.11.1
TC Rep_790_c_1 Rep_790_c_1_40 48819 49589 + 3.A.1.11.1
TC Rep_790_c_1 Rep_790_c_1_41 49692 50723 + 3.A.1.11.1
TC Rep_790_c_1 Rep_790_c_1_42 50835 51872 + 3.A.1.11.1
NULL(UNKNOWN) Rep_790_c_1 Rep_790_c_1_43 52019 52753 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_790_c_1 Rep_790_c_1_44 52770 52928 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_790_c_1 Rep_790_c_1_45 53431 54807 + 2.A.25.1.4
Gene ID: Rep_790_c_1_36
Type: CAZyme
Location: 44921 - 45721 (-)
Gene ID: Rep_790_c_1_37
Type:
Location: 45714 - 46520 (-)
Gene ID: Rep_790_c_1_38
Type: TC
Location: 46845 - 47978 (+)
Gene ID: Rep_790_c_1_39
Type: TC
Location: 47959 - 48819 (+)
Gene ID: Rep_790_c_1_40
Type: TC
Location: 48819 - 49589 (+)
Gene ID: Rep_790_c_1_41
Type: TC
Location: 49692 - 50723 (+)
Gene ID: Rep_790_c_1_42
Type: TC
Location: 50835 - 51872 (+)
Gene ID: Rep_790_c_1_43
Type:
Location: 52019 - 52753 (-)
Gene ID: Rep_790_c_1_44
Type:
Location: 52770 - 52928 (-)
Gene ID: Rep_790_c_1_45
Type: TC
Location: 53431 - 54807 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List