dbCAN Logo

Cluster: Rep_790_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_790_c_18 Rep_790_c_18_50 52440 54665 - 1.C.14.1.1
CAZyme Rep_790_c_18 Rep_790_c_18_51 55635 56891 + CE16
TC Rep_790_c_18 Rep_790_c_18_52 57012 58091 + 9.B.34.1.2
TC Rep_790_c_18 Rep_790_c_18_53 58601 59806 + 2.A.1.2.9
TC Rep_790_c_18 Rep_790_c_18_54 60210 61790 + 2.A.35.2.2
NULL(UNKNOWN) Rep_790_c_18 Rep_790_c_18_55 61868 62842 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_790_c_18 Rep_790_c_18_56 63092 65038 + 2.A.21.9.1
TC Rep_790_c_18 Rep_790_c_18_57 65096 66637 - 8.A.59.4.2
Gene ID: Rep_790_c_18_50
Type: TC
Location: 52440 - 54665 (-)
Gene ID: Rep_790_c_18_51
Type: CAZyme
Location: 55635 - 56891 (+)
Gene ID: Rep_790_c_18_52
Type: TC
Location: 57012 - 58091 (+)
Gene ID: Rep_790_c_18_53
Type: TC
Location: 58601 - 59806 (+)
Gene ID: Rep_790_c_18_54
Type: TC
Location: 60210 - 61790 (+)
Gene ID: Rep_790_c_18_55
Type:
Location: 61868 - 62842 (-)
Gene ID: Rep_790_c_18_56
Type: TC
Location: 63092 - 65038 (+)
Gene ID: Rep_790_c_18_57
Type: TC
Location: 65096 - 66637 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List