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Cluster: Rep_790_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_790_c_16 Rep_790_c_16_55 69416 70099 - 3.A.1.122.14
NULL(UNKNOWN) Rep_790_c_16 Rep_790_c_16_56 70108 70779 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_790_c_16 Rep_790_c_16_57 71092 72015 - 8.A.5.1.7
CAZyme Rep_790_c_16 Rep_790_c_16_58 72307 74379 + GH13_19
TC Rep_790_c_16 Rep_790_c_16_59 74914 76152 + 1.B.9.1.1
pfam Rep_790_c_16 Rep_790_c_16_60 76168 78558 + Lipase_bact_N
TC Rep_790_c_16 Rep_790_c_16_61 79036 80316 + 1.B.52.2.1
peptidase Rep_790_c_16 Rep_790_c_16_62 80397 82226 - M04.003
TC Rep_790_c_16 Rep_790_c_16_63 82647 83300 - 1.B.39.1.6
Gene ID: Rep_790_c_16_55
Type: TC
Location: 69416 - 70099 (-)
Gene ID: Rep_790_c_16_56
Type:
Location: 70108 - 70779 (-)
Gene ID: Rep_790_c_16_57
Type: TC
Location: 71092 - 72015 (-)
Gene ID: Rep_790_c_16_58
Type: CAZyme
Location: 72307 - 74379 (+)
Gene ID: Rep_790_c_16_59
Type: TC
Location: 74914 - 76152 (+)
Gene ID: Rep_790_c_16_60
Type: pfam
Location: 76168 - 78558 (+)
Gene ID: Rep_790_c_16_61
Type: TC
Location: 79036 - 80316 (+)
Gene ID: Rep_790_c_16_62
Type: peptidase
Location: 80397 - 82226 (-)
Gene ID: Rep_790_c_16_63
Type: TC
Location: 82647 - 83300 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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