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Cluster: Rep_790_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_790_c_8 Rep_790_c_8_52 55918 57147 + 1.A.11.2.5
TC Rep_790_c_8 Rep_790_c_8_53 57289 58302 + 3.A.1.10.2
TC Rep_790_c_8 Rep_790_c_8_54 58386 60011 + 3.A.1.10.2
TC Rep_790_c_8 Rep_790_c_8_55 60011 61042 + 3.A.1.10.4
pfam Rep_790_c_8 Rep_790_c_8_56 61173 62585 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme Rep_790_c_8 Rep_790_c_8_57 62708 65113 - GH94
CAZyme Rep_790_c_8 Rep_790_c_8_58 65232 67145 - GH20
pfam Rep_790_c_8 Rep_790_c_8_59 67142 68026 - BcrAD_BadFG
CAZyme Rep_790_c_8 Rep_790_c_8_60 68023 69747 - GH9
TC Rep_790_c_8 Rep_790_c_8_61 69804 70799 - 3.A.1.5.20
TC Rep_790_c_8 Rep_790_c_8_62 70842 71825 - 3.A.1.5.15
TC Rep_790_c_8 Rep_790_c_8_63 71828 72853 - 3.A.1.5.14
TC Rep_790_c_8 Rep_790_c_8_64 72856 73842 - 3.A.1.5.16
TC Rep_790_c_8 Rep_790_c_8_65 74012 75682 - 3.A.1.5.7
STP Rep_790_c_8 Rep_790_c_8_66 76593 79982 - HATPase_c | HisKA | Response_reg
pfam Rep_790_c_8 Rep_790_c_8_67 80190 81212 - MTS | PrmA | MTS_N
TC Rep_790_c_8 Rep_790_c_8_68 81285 82370 - 2.A.86.2.1
Gene ID: Rep_790_c_8_52
Type: TC
Location: 55918 - 57147 (+)
Gene ID: Rep_790_c_8_53
Type: TC
Location: 57289 - 58302 (+)
Gene ID: Rep_790_c_8_54
Type: TC
Location: 58386 - 60011 (+)
Gene ID: Rep_790_c_8_55
Type: TC
Location: 60011 - 61042 (+)
Gene ID: Rep_790_c_8_56
Type: pfam
Location: 61173 - 62585 (-)
Gene ID: Rep_790_c_8_57
Type: CAZyme
Location: 62708 - 65113 (-)
Gene ID: Rep_790_c_8_58
Type: CAZyme
Location: 65232 - 67145 (-)
Gene ID: Rep_790_c_8_59
Type: pfam
Location: 67142 - 68026 (-)
Gene ID: Rep_790_c_8_60
Type: CAZyme
Location: 68023 - 69747 (-)
Gene ID: Rep_790_c_8_61
Type: TC
Location: 69804 - 70799 (-)
Gene ID: Rep_790_c_8_62
Type: TC
Location: 70842 - 71825 (-)
Gene ID: Rep_790_c_8_63
Type: TC
Location: 71828 - 72853 (-)
Gene ID: Rep_790_c_8_64
Type: TC
Location: 72856 - 73842 (-)
Gene ID: Rep_790_c_8_65
Type: TC
Location: 74012 - 75682 (-)
Gene ID: Rep_790_c_8_66
Type: STP
Location: 76593 - 79982 (-)
Gene ID: Rep_790_c_8_67
Type: pfam
Location: 80190 - 81212 (-)
Gene ID: Rep_790_c_8_68
Type: TC
Location: 81285 - 82370 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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