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Cluster: Rep_790_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_790_c_6 Rep_790_c_6_82 106670 107512 + 1.A.16.1.3
pfam Rep_790_c_6 Rep_790_c_6_83 108192 108374 + NapE
TC Rep_790_c_6 Rep_790_c_6_84 108421 109605 + 5.A.3.4.1
TC Rep_790_c_6 Rep_790_c_6_85 109629 112091 + 5.A.3.4.1
CAZyme Rep_790_c_6 Rep_790_c_6_86 112290 113414 + GH36
NULL(UNKNOWN) Rep_790_c_6 Rep_790_c_6_87 113466 113921 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_790_c_6 Rep_790_c_6_88 114090 115298 - 2.A.119.3.1
Gene ID: Rep_790_c_6_82
Type: TC
Location: 106670 - 107512 (+)
Gene ID: Rep_790_c_6_83
Type: pfam
Location: 108192 - 108374 (+)
Gene ID: Rep_790_c_6_84
Type: TC
Location: 108421 - 109605 (+)
Gene ID: Rep_790_c_6_85
Type: TC
Location: 109629 - 112091 (+)
Gene ID: Rep_790_c_6_86
Type: CAZyme
Location: 112290 - 113414 (+)
Gene ID: Rep_790_c_6_87
Type:
Location: 113466 - 113921 (+)
Gene ID: Rep_790_c_6_88
Type: TC
Location: 114090 - 115298 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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