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Cluster: Rep_790_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_790_c_6 Rep_790_c_6_4 1127 3472 - GH33
CAZyme Rep_790_c_6 Rep_790_c_6_5 3896 5032 - CE9
pfam Rep_790_c_6 Rep_790_c_6_6 5036 5899 - ROK
pfam Rep_790_c_6 Rep_790_c_6_7 5887 6597 - NanE
TC Rep_790_c_6 Rep_790_c_6_8 6824 7789 + 2.A.56.1.6
TC Rep_790_c_6 Rep_790_c_6_9 7840 8361 + 2.A.56.1.6
TC Rep_790_c_6 Rep_790_c_6_10 8369 9652 + 2.A.56.1.6
Gene ID: Rep_790_c_6_4
Type: CAZyme
Location: 1127 - 3472 (-)
Gene ID: Rep_790_c_6_5
Type: CAZyme
Location: 3896 - 5032 (-)
Gene ID: Rep_790_c_6_6
Type: pfam
Location: 5036 - 5899 (-)
Gene ID: Rep_790_c_6_7
Type: pfam
Location: 5887 - 6597 (-)
Gene ID: Rep_790_c_6_8
Type: TC
Location: 6824 - 7789 (+)
Gene ID: Rep_790_c_6_9
Type: TC
Location: 7840 - 8361 (+)
Gene ID: Rep_790_c_6_10
Type: TC
Location: 8369 - 9652 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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