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Cluster: Rep_790_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_790_c_4 Rep_790_c_4_187 182069 183007 - 9.B.34.1.1
pfam Rep_790_c_4 Rep_790_c_4_188 183252 184703 + Lyase_1 | FumaraseC_C
TC Rep_790_c_4 Rep_790_c_4_189 184831 186138 + 2.A.13.1.1
CAZyme Rep_790_c_4 Rep_790_c_4_190 186532 188022 + CBM41
CAZyme Rep_790_c_4 Rep_790_c_4_191 188019 190130 + GH13_13
TC Rep_790_c_4 Rep_790_c_4_192 190290 192092 + 5.A.1.1.1
TF Rep_790_c_4 Rep_790_c_4_193 192265 192894 + GerE
TC Rep_790_c_4 Rep_790_c_4_194 192993 194738 - 2.A.36.6.5
pfam Rep_790_c_4 Rep_790_c_4_195 195117 195383 + DUF4212
TC Rep_790_c_4 Rep_790_c_4_196 195394 197097 + 2.A.21.7.5
TC Rep_790_c_4 Rep_790_c_4_197 197195 197866 - 2.A.88.8.6
Gene ID: Rep_790_c_4_187
Type: TC
Location: 182069 - 183007 (-)
Gene ID: Rep_790_c_4_188
Type: pfam
Location: 183252 - 184703 (+)
Gene ID: Rep_790_c_4_189
Type: TC
Location: 184831 - 186138 (+)
Gene ID: Rep_790_c_4_190
Type: CAZyme
Location: 186532 - 188022 (+)
Gene ID: Rep_790_c_4_191
Type: CAZyme
Location: 188019 - 190130 (+)
Gene ID: Rep_790_c_4_192
Type: TC
Location: 190290 - 192092 (+)
Gene ID: Rep_790_c_4_193
Type: TF
Location: 192265 - 192894 (+)
Gene ID: Rep_790_c_4_194
Type: TC
Location: 192993 - 194738 (-)
Gene ID: Rep_790_c_4_195
Type: pfam
Location: 195117 - 195383 (+)
Gene ID: Rep_790_c_4_196
Type: TC
Location: 195394 - 197097 (+)
Gene ID: Rep_790_c_4_197
Type: TC
Location: 197195 - 197866 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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