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Cluster: Rep_790_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_790_c_3 Rep_790_c_3_114 130708 132249 + 2.A.21.5.1
pfam Rep_790_c_3 Rep_790_c_3_115 132260 133630 + SDH_alpha | SDH_beta
TC Rep_790_c_3 Rep_790_c_3_116 133728 135095 - 2.A.61.1.1
TC Rep_790_c_3 Rep_790_c_3_117 135501 137264 - 1.B.52.2.1
pfam Rep_790_c_3 Rep_790_c_3_118 137444 138049 + Hydrolase | Hydrolase_like | HAD_2
pfam Rep_790_c_3 Rep_790_c_3_119 138130 138603 - FKBP_C | FKBP_N
TC Rep_790_c_3 Rep_790_c_3_120 138825 139439 + 9.B.186.1.1
TC Rep_790_c_3 Rep_790_c_3_121 139625 141235 + 1.B.52.2.1
pfam Rep_790_c_3 Rep_790_c_3_122 141337 142875 - DAO | DAO_C
STP Rep_790_c_3 Rep_790_c_3_123 143273 144193 + PfkB
CAZyme Rep_790_c_3 Rep_790_c_3_124 144315 145961 - GH32
TF Rep_790_c_3 Rep_790_c_3_125 146037 147029 - LacI
TC Rep_790_c_3 Rep_790_c_3_126 147330 148769 + 4.A.1.2.8
Gene ID: Rep_790_c_3_114
Type: TC
Location: 130708 - 132249 (+)
Gene ID: Rep_790_c_3_115
Type: pfam
Location: 132260 - 133630 (+)
Gene ID: Rep_790_c_3_116
Type: TC
Location: 133728 - 135095 (-)
Gene ID: Rep_790_c_3_117
Type: TC
Location: 135501 - 137264 (-)
Gene ID: Rep_790_c_3_118
Type: pfam
Location: 137444 - 138049 (+)
Gene ID: Rep_790_c_3_119
Type: pfam
Location: 138130 - 138603 (-)
Gene ID: Rep_790_c_3_120
Type: TC
Location: 138825 - 139439 (+)
Gene ID: Rep_790_c_3_121
Type: TC
Location: 139625 - 141235 (+)
Gene ID: Rep_790_c_3_122
Type: pfam
Location: 141337 - 142875 (-)
Gene ID: Rep_790_c_3_123
Type: STP
Location: 143273 - 144193 (+)
Gene ID: Rep_790_c_3_124
Type: CAZyme
Location: 144315 - 145961 (-)
Gene ID: Rep_790_c_3_125
Type: TF
Location: 146037 - 147029 (-)
Gene ID: Rep_790_c_3_126
Type: TC
Location: 147330 - 148769 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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