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Cluster: Rep_790_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_790_c_2 Rep_790_c_2_132 166639 168588 - 4.A.2.1.12
NULL(UNKNOWN) Rep_790_c_2 Rep_790_c_2_133 168727 168870 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_790_c_2 Rep_790_c_2_134 169171 170112 + 1.A.34.1.3
pfam Rep_790_c_2 Rep_790_c_2_135 170482 172185 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
TC Rep_790_c_2 Rep_790_c_2_136 172298 173194 - 3.A.1.3.19
TC Rep_790_c_2 Rep_790_c_2_137 173195 174031 - 2.A.56.3.1
TC Rep_790_c_2 Rep_790_c_2_138 174067 174864 - 3.A.1.3.17
TC Rep_790_c_2 Rep_790_c_2_139 174864 175583 - 3.A.1.3.7
pfam Rep_790_c_2 Rep_790_c_2_140 175885 176937 + DAHP_synth_1
pfam Rep_790_c_2 Rep_790_c_2_141 177031 177279 - DUF3297
TC Rep_790_c_2 Rep_790_c_2_142 177483 179462 + 1.B.52.2.1
STP Rep_790_c_2 Rep_790_c_2_143 179471 180847 + SBP_bac_1
NULL(UNKNOWN) Rep_790_c_2 Rep_790_c_2_144 181115 181522 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_790_c_2 Rep_790_c_2_145 181637 183268 - 1.B.52.2.1
pfam Rep_790_c_2 Rep_790_c_2_146 183728 183979 - DUF2999
CAZyme Rep_790_c_2 Rep_790_c_2_147 184114 186078 - GH13_11
TC Rep_790_c_2 Rep_790_c_2_148 186516 187754 + 1.B.3.1.1
Gene ID: Rep_790_c_2_132
Type: TC
Location: 166639 - 168588 (-)
Gene ID: Rep_790_c_2_133
Type:
Location: 168727 - 168870 (-)
Gene ID: Rep_790_c_2_134
Type: TC
Location: 169171 - 170112 (+)
Gene ID: Rep_790_c_2_135
Type: pfam
Location: 170482 - 172185 (-)
Gene ID: Rep_790_c_2_136
Type: TC
Location: 172298 - 173194 (-)
Gene ID: Rep_790_c_2_137
Type: TC
Location: 173195 - 174031 (-)
Gene ID: Rep_790_c_2_138
Type: TC
Location: 174067 - 174864 (-)
Gene ID: Rep_790_c_2_139
Type: TC
Location: 174864 - 175583 (-)
Gene ID: Rep_790_c_2_140
Type: pfam
Location: 175885 - 176937 (+)
Gene ID: Rep_790_c_2_141
Type: pfam
Location: 177031 - 177279 (-)
Gene ID: Rep_790_c_2_142
Type: TC
Location: 177483 - 179462 (+)
Gene ID: Rep_790_c_2_143
Type: STP
Location: 179471 - 180847 (+)
Gene ID: Rep_790_c_2_144
Type:
Location: 181115 - 181522 (+)
Gene ID: Rep_790_c_2_145
Type: TC
Location: 181637 - 183268 (-)
Gene ID: Rep_790_c_2_146
Type: pfam
Location: 183728 - 183979 (-)
Gene ID: Rep_790_c_2_147
Type: CAZyme
Location: 184114 - 186078 (-)
Gene ID: Rep_790_c_2_148
Type: TC
Location: 186516 - 187754 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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