Cluster: Rep_769_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_769
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_769_c_0 | Rep_769_c_0_1079 | 1104773 | 1106551 | + | 3.A.1.106.1 |
| pfam | Rep_769_c_0 | Rep_769_c_0_1080 | 1106552 | 1107097 | - | Smr |
| NULL(UNKNOWN) | Rep_769_c_0 | Rep_769_c_0_1081 | 1107063 | 1107572 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_769_c_0 | Rep_769_c_0_1082 | 1107562 | 1108746 | - | GH102 |
Gene ID: Rep_769_c_0_1079
Type: TC
Location: 1104773 - 1106551 (+)
Type: TC
Location: 1104773 - 1106551 (+)
Gene ID: Rep_769_c_0_1080
Type: pfam
Location: 1106552 - 1107097 (-)
Type: pfam
Location: 1106552 - 1107097 (-)
Gene ID: Rep_769_c_0_1081
Type:
Location: 1107063 - 1107572 (-)
Type:
Location: 1107063 - 1107572 (-)
Gene ID: Rep_769_c_0_1082
Type: CAZyme
Location: 1107562 - 1108746 (-)
Type: CAZyme
Location: 1107562 - 1108746 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp000432275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.