Cluster: Rep_769_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_769
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_769_c_0 | Rep_769_c_0_112 | 130826 | 131635 | - | GT32 |
| TC | Rep_769_c_0 | Rep_769_c_0_113 | 131787 | 134189 | + | 1.A.23.4.1 |
| NULL(UNKNOWN) | Rep_769_c_0 | Rep_769_c_0_114 | 134239 | 134439 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_769_c_0 | Rep_769_c_0_115 | 134543 | 136837 | - | OKR_DC_1 | OKR_DC_1_N | OKR_DC_1_C |
| TC | Rep_769_c_0 | Rep_769_c_0_116 | 136851 | 138332 | - | 2.A.3.2.5 |
Gene ID: Rep_769_c_0_112
Type: CAZyme
Location: 130826 - 131635 (-)
Type: CAZyme
Location: 130826 - 131635 (-)
Gene ID: Rep_769_c_0_113
Type: TC
Location: 131787 - 134189 (+)
Type: TC
Location: 131787 - 134189 (+)
Gene ID: Rep_769_c_0_114
Type:
Location: 134239 - 134439 (-)
Type:
Location: 134239 - 134439 (-)
Gene ID: Rep_769_c_0_115
Type: pfam
Location: 134543 - 136837 (-)
Type: pfam
Location: 134543 - 136837 (-)
Gene ID: Rep_769_c_0_116
Type: TC
Location: 136851 - 138332 (-)
Type: TC
Location: 136851 - 138332 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp000432275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.